Gene Bphy_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3212 
Symbol 
ID6244895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp124510 
End bp125763 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content56% 
IMG OID642595006 
Productmajor facilitator transporter 
Protein accessionYP_001859418 
Protein GI186472076 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC CTGCAGCAAG CAATCATCAA AAAATCGAGT CTGCCCTAGT TGACCCTCCG 
GTCGAACGTG GGTGGTCGCG TGCGGGCATC GTCGCAGCGT TGCCGATATT GGCGATTGTG
CTGGTCGGCA TCGCTGGCCA TGCGACCTCA TCCCTTAAGC CGTTGATTAT CCAGGCCTTC
GTGCAGTCGG TTGGCTTTGA CAAGGCAACA TCAGGCTACC TCTTGACGGT CGAGATGATT
TCGACAAGCG CCGGTAGCAT TGTGGCGACG GCATTTCCGT TTGCTCTGCG ACGTAGAGGC
TATCTGTTCG GCGCTCTCGC CCTGATGATG GTTGCCAATC TGGTCAGTAT TTCGTTCAAG
AGTGATCCGG GGACGATGCT TTACGCGTTA CGTTGCCTGT CCGGCTTCGG TGCGGGCTTT
GGTCTTGGGC GTCTTGGGAT CCTTATCGCG TTGTCGGGCC GTCCTGGGAA GACCGCTGCG
CTCTACTCAA CAAGCACACA GCTTTACGGA GCCGCCGCCG CCTTCGCGAT GCCGTTCATT
GATCGATTGT GCGGAGCGAA TTCGATCTTT GTCATTCTTG CAGGGACCGT CCCGCTTGCG
TTGGTGCTGA TTGGATGGGT ACCGGAAAGC AACGCGAAGG TCGAGAAAAA GAAGGCAATC
TCGACCAGCA CGCCGCACGC GCTAGGGTTG GGTGAGAAAT TGATTCTTGC GATCACTTTC
GGCGTGTTTT ATCTCGGCGT CGGAACTTTT TGGCCCTTCA TCTCGGTCCT CGGCGAGACT
GCTGCAATTG GCCATACTCA AATGTCGTCC CTTCTTGGCT GGGCTGCTAT CGCCAGTGCA
GTGGGATCCG GAACGGCGGT TTTCGCCGGA GATCGGAAGG CATCTGCTCC TATTATTACG
CTGTTTTTCA TTGCGCTTTG TCTTTCCGTT GTGATGCAGC TTGCGGTTCC CCAATCGTTG
TTCATTTTTG TAACCTCAGT ATTGCTGTTC GCGTTTGCCT ACTGGGTCAT CAATCCGATG
ATCCTGGGCG TGATGTCAAA GCTCGATACG ACCGGACAGA TGAACGGCGT TTATTACATC
GTCGCCGTCG GGGGCATTTC CCTCGGACCG GCTTTGGCGG GATGGGTGCT CACGCATGGG
AGTGAACGAT CCACAAGCAC TGAGTTTCTC CGCGCTGTAA GCCTTGCCCT GCTGGGAGTT
TCCTCGGCAG TGCAGATTTA CTATGCATTC CGTGCGCGGC GCCTACCAGA CTAG
 
Protein sequence
MSDPAASNHQ KIESALVDPP VERGWSRAGI VAALPILAIV LVGIAGHATS SLKPLIIQAF 
VQSVGFDKAT SGYLLTVEMI STSAGSIVAT AFPFALRRRG YLFGALALMM VANLVSISFK
SDPGTMLYAL RCLSGFGAGF GLGRLGILIA LSGRPGKTAA LYSTSTQLYG AAAAFAMPFI
DRLCGANSIF VILAGTVPLA LVLIGWVPES NAKVEKKKAI STSTPHALGL GEKLILAITF
GVFYLGVGTF WPFISVLGET AAIGHTQMSS LLGWAAIASA VGSGTAVFAG DRKASAPIIT
LFFIALCLSV VMQLAVPQSL FIFVTSVLLF AFAYWVINPM ILGVMSKLDT TGQMNGVYYI
VAVGGISLGP ALAGWVLTHG SERSTSTEFL RAVSLALLGV SSAVQIYYAF RARRLPD