| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2894 |
|---|
| Symbol | |
|---|
| ID | 6244377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 3249196 |
|---|
| End bp | 3250026 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642594699 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001859112 |
|---|
| Protein GI | 186477642 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0656517 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCT CGAACGATAC CTTCGCCGCC CGCGCCCAGC CGCACCGGCC CGTCCGCACC
GTGCTCGTCA CGGGCGCCGC GCATCGGATC GGCAGAGGGC TGGCCGTCGG GTTCGCCGCG
GCGGGCTGGG ACGTGGCGGT GCATTACGGG TCGTCGCAGG AACAGGCCGA CGGCGTAGTC
GCCGAAATCG CCGCGCTGGG ACGGCGGGCG GTCGCGCTGA AGGCGGATCT GTCCGTCGAG
GCGGAAGTCG AGCGGCTCGT GCCCGATTGC ATGGCGGCGC TCGGGCGTCC GTCCTGCATC
GTGAACAACG CGTCGCTGTT CGACGAGGAC ACCGCGTTCG ATGTCGGTTA CGCGAAGCTG
CTGCACCTGA CGTCGATCAA CCTCGGCGCG CCGCTCGTGC TTGCGCGGAT GCTGCACGAA
GTCACGCCGG ACGACGCGCG GCACGATGAA TCGCTGCGCA CGTGCGTGAT CAACGTGCTC
GACCAGAAGC TGTACAACAT GAATCCGGAT TACCTGTCGT ACACACTGTC GAAGGCCGCG
CTCGGCACGG CGACCGTCGC GCTCGCGCAG GCGCTGGCGC CGAAGGTGCG TGTCGTGGGT
CTCGCGCCAG GCCTCACGCT GCAATCGGGC GATCAGACGC CAGCCAGCTT CGCGGATGCG
CACAAGGTGA CGCCGCTCGG CCGGGCGTCG CGCGTCGAGG ATCTCGTCGC GGCGGCGCTG
TATCTCGCGG ATGCGCGCGG CGTGACGGGC ACGACGCTTG TCGTCGATGG CGGCCAGCAT
CTCGTGCCGC TGCCGCGCGA CGTGATGTTC TTGACGGGCG GCGACGGCTA G
|
|---|
| Protein sequence | MTVSNDTFAA RAQPHRPVRT VLVTGAAHRI GRGLAVGFAA AGWDVAVHYG SSQEQADGVV
AEIAALGRRA VALKADLSVE AEVERLVPDC MAALGRPSCI VNNASLFDED TAFDVGYAKL
LHLTSINLGA PLVLARMLHE VTPDDARHDE SLRTCVINVL DQKLYNMNPD YLSYTLSKAA
LGTATVALAQ ALAPKVRVVG LAPGLTLQSG DQTPASFADA HKVTPLGRAS RVEDLVAAAL
YLADARGVTG TTLVVDGGQH LVPLPRDVMF LTGGDG
|
|---|
| |