| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2884 |
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| Symbol | |
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| ID | 6244367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 3238315 |
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| End bp | 3239265 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642594689 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001859102 |
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| Protein GI | 186477632 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000000365079 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATCGA TTCACGATCT GCGCACTGAC GACATCGCCT GCGAAGCACT GCTGGGCGCG
CTCGACGGCA GAACGCAGCT GGTCGCCATC TACGACGCAA GCGACCGGCT GATGTTCGCG
AACAGCGCGT TCAAGCATGC GTTCAGGCTC AACCGCGAGC GCGGCGACAT CACGTTCGCC
GATCTCGTGC TGCGCGGGAT TCTGGGGCAA TGCGGGCCGC GCATCGGAGG CGACGACGCG
TCGGCCGTGA TCGCCGATGC GATCGCCGCA CGCCGCGAAC GCGCCGGACA GCGCAGCTTC
GCGACGGAGC TCGTCGACGG ACGCTGGTTC TGGATGACGG AATCGCTGCT GGAGAACGAC
TGGATCGTGC TGACGGGTAC CGAGATCTCG GCACTGCGCT CCAACGAGCA GGCGTGGATC
GGCGCGCACG AACGCGCGGT GCAGGAAGCG CGCACCGACG CGCTGACGGG CCTCGCGAAC
CGGCGCCATT CGATGTCGTC GCTCGAACTG GCGATCACGG CTGCTGCCGG CACCGAGACG
CCGCTCACGG TCGCGCTCGT CGACCTCGAT CATTTCAAGC AGATCAACGA TTCGCACGGG
CACGCCGCAG GCGACGCGGT GCTGCGCGAT TTCGGCGAAG TGTGCCGTCA CGCGACGCGT
CAGACGGACA TCGCGGGCCG CATCGGAGGC GAGGAATTTC TGGTCGTGTT TCCGTCGACG
TCGGTCGAGC ACGGCGTGTC GGCTGTCGAA CGGATGCGCC GCCAGGTGCT GAGCCGCCGC
GTGCAGGTCG CCGATGACCG TGCGATCCGC TATTCCTTTT CGGCGGGCGT CTGCAGGGTG
GAACTGAGCG ACGACCTCAA CACGACGCTC GCTCGCGCCG ACAGCGCGCT GTATTCGGCG
AAGCGCGAAG GACGCAACCG CACCGTCGCG TGGTCGGCAC CGTTGCAGTA A
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| Protein sequence | MKSIHDLRTD DIACEALLGA LDGRTQLVAI YDASDRLMFA NSAFKHAFRL NRERGDITFA
DLVLRGILGQ CGPRIGGDDA SAVIADAIAA RRERAGQRSF ATELVDGRWF WMTESLLEND
WIVLTGTEIS ALRSNEQAWI GAHERAVQEA RTDALTGLAN RRHSMSSLEL AITAAAGTET
PLTVALVDLD HFKQINDSHG HAAGDAVLRD FGEVCRHATR QTDIAGRIGG EEFLVVFPST
SVEHGVSAVE RMRRQVLSRR VQVADDRAIR YSFSAGVCRV ELSDDLNTTL ARADSALYSA
KREGRNRTVA WSAPLQ
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