| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2586 |
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| Symbol | holA |
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| ID | 6244069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2923129 |
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| End bp | 2924256 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642594375 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_001858804 |
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| Protein GI | 186477334 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000000000748546 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACTGC GTCTTGACGC GCTCGAAGCG CATCTCGCGA AAGGTCTCGC CGGTCTGTAC
ATCGTGTACG GCGACGAGCA TCTGCTCGCG CAGGAAGCGT GCGACCGCAT CCGCGCGGCG
GCGCGTGCGG GCGGCTTCAC GGATCGCACG GTGTTCACGG TGGAGCGCGG CTTCGACTGG
AGCTCGCTGC TCGGCGCGAG CCAGTCGATG TCGCTGTTTG GCGACCGGCA ACTTGTCGAG
TTGCGCATTC CGTCAGGCAA GCCCGGCAAG GAAGGCGCCG ACGCGCTCAA GACTCTGGCC
GCAGCCGCCA ACCCCGACGT GCTGACGCTC GTCACGCTGC CGCGTCTCGA CGCGGCGACG
CAAAAGGCCG CGTGGTTCAC TGCGCTGGCC GACGCAGGCG TCGCGCTGAA GATAGATCCC
GTCGAGCGTG CGCAATTGCC TGGGTGGATC AGTCAGCGCC TCGCGTCGCA GAATCAGCGA
GTTGCGCCAG GTGAAGACGG CAAGCGCGCG TTGCAGTTCA TCGCGGAGCG CGTCGAAGGC
AATCTGCTCG CGGCGCATCA GGAGATCCAG AAGCTCGGGC TGCTGTATCC CTCTGGCGTA
TTGACGTTCG AACAGGTTCA CGACGCGGTG CTGAACGTCG CGCGCTACGA CGTGTTCAAG
CTCAACGAAG CGATGCTCGC GGGCGACGTC GGCCGTCTGT CGCGCATGAT TGACGGTCTG
AAGGGCGAAG GCGAAGCAGC CGTGCTGGTG CTGTGGGCCG TCGTCGAAGA AATCCGCACG
CTGCTGCGGA TCAAGCGCGG CGTCGATGCG GGCAAGCCGC TTGCCATGCT TTTGCGTGAA
AACCGCGTGT GGGGGCCGCG TGAACGGCTC GTCGGTCCGG CGCTGTCGCG TGTGACGGAA
GCCGCGCTGG AACGGGCGCT CTCGCTCGCG GCCAGACTCG ACCGGCAGGT CAAGGGGCTG
TCGGGCGGCA CGCCAGGCGA TCGTCGCAAT GACCCGCCGC CCGATCCGTG GGCGGGACTG
TTCGAACTTG CGTTGACGGT CGCCGCGGCG CCGGCGCCGA AGACGCACGC GGCGCCGGTC
GGACGGGCGC CGTCAGCGCG AAGCGCGCCG TTACGCCGTC CGTCCTAG
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| Protein sequence | MQLRLDALEA HLAKGLAGLY IVYGDEHLLA QEACDRIRAA ARAGGFTDRT VFTVERGFDW
SSLLGASQSM SLFGDRQLVE LRIPSGKPGK EGADALKTLA AAANPDVLTL VTLPRLDAAT
QKAAWFTALA DAGVALKIDP VERAQLPGWI SQRLASQNQR VAPGEDGKRA LQFIAERVEG
NLLAAHQEIQ KLGLLYPSGV LTFEQVHDAV LNVARYDVFK LNEAMLAGDV GRLSRMIDGL
KGEGEAAVLV LWAVVEEIRT LLRIKRGVDA GKPLAMLLRE NRVWGPRERL VGPALSRVTE
AALERALSLA ARLDRQVKGL SGGTPGDRRN DPPPDPWAGL FELALTVAAA PAPKTHAAPV
GRAPSARSAP LRRPS
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