| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2516 |
|---|
| Symbol | glcF |
|---|
| ID | 6243999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 2834511 |
|---|
| End bp | 2835737 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642594305 |
|---|
| Product | glycolate oxidase iron-sulfur subunit |
|---|
| Protein accession | YP_001858734 |
|---|
| Protein GI | 186477264 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0531711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCA ATCTCGCCGA CTTCATTCGC AATACACCGG ACGGTGACGA AGCCGACGCC
ATCCTGCGCA AATGCGTGCA TTGCGGCTTC TGCACAGCGA CCTGCCCGAC CTATCAGCTG
CTGGGCGACG AACTCGACGG TCCGCGCGGC CGAATCTATC TGATCAAGCA GATGGTGGAA
GGCGCGCCCG TCACGCGCAG CACGCAGTTG CACCTGGATC GTTGCCTGAC TTGCCGCAAT
TGCGAATCCA CCTGCCCTTC CGGCGTCCAG TACGGCAAGC TCGTCGAGAT AGGCCGCAAG
CTCACTGAAG AGAAAGTGCC GCGCCCGTTT GGCCAGCGCC TGATGCGCCG CTTGCTCGCG
AGCTTCGTGC CGAACAGCAC GCTGTTCACC CCCGCGATGC GGCTCGGTCA GCACTTTCGC
CCGCTGCTGC CGAAGAAGCT GCGGGACAAG GTGCCGCAAC GTCAGCGCCA GCTCGAATGG
CCGACGGCCA CGCATCCGCG CAAGATGCTG ATGCTCGCAG GGTGTGTGCA GCCTTCGATG
ATGCCGAACG TCAACATTGC GACGGCGCGC GTGCTGGACG CGCTCGGCGT CCAGACGGTG
ATCGCACCGG AAGCGGGTTG TTGCGGCGCG ATCCGCCTGC ACCTCGGCTA CAACGACGAG
GCGCTCGACG ACGTGCGCCA GAACATCGAC GCATGGTGGC CGCATGTCGA GCAAGGTGCG
GAAGCGATCG TGATGAATGC GTCTGGTTGC GGCGCGACTG TGAAGGAGTA TGCCCACCTG
ATGCGCAACG ACCCGGCCTA TGCGGAGAAG GCGAAACGCA TTGTCGAGCT GACGCGCGAC
CTCAGCGAGA TTCTGCCGGA CTTCGAAGAA GCGCTGACGC CGCTCACGCG GCGCCGGGCG
ATTCATACGG TTGCGTATCA CCCGCCCTGC ACGCTTCAGC ATGGCCAGCA GATACGCGGC
AAGGTCGAGC ATCTTCTGAC CGCGCTGGGC ATCGAAGTCA GGCTCCCCGC CGACAGCCAT
CTGTGCTGTG GCTCCGCAGG CACCTATTCC CTCACGCAGC CGGCGCTTTC GTACGCATTG
CGCAACCAGA AGCTGGAAAA GCTGAAAGCA CAGGAGCCGC AGATCGTCGT GTCCGCGAAT
GTGGGTTGTA TCGCGCATCT GCAAAGCGGC ACCTCCATGC CCGTCGTGCA TTGGGTCGAA
CTTGTCGAGC ACATGCTCGC GTCCTGA
|
|---|
| Protein sequence | MQTNLADFIR NTPDGDEADA ILRKCVHCGF CTATCPTYQL LGDELDGPRG RIYLIKQMVE
GAPVTRSTQL HLDRCLTCRN CESTCPSGVQ YGKLVEIGRK LTEEKVPRPF GQRLMRRLLA
SFVPNSTLFT PAMRLGQHFR PLLPKKLRDK VPQRQRQLEW PTATHPRKML MLAGCVQPSM
MPNVNIATAR VLDALGVQTV IAPEAGCCGA IRLHLGYNDE ALDDVRQNID AWWPHVEQGA
EAIVMNASGC GATVKEYAHL MRNDPAYAEK AKRIVELTRD LSEILPDFEE ALTPLTRRRA
IHTVAYHPPC TLQHGQQIRG KVEHLLTALG IEVRLPADSH LCCGSAGTYS LTQPALSYAL
RNQKLEKLKA QEPQIVVSAN VGCIAHLQSG TSMPVVHWVE LVEHMLAS
|
|---|
| |