Gene Bphy_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2488 
Symbol 
ID6243972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2798816 
End bp2799892 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content63% 
IMG OID642594278 
Producthypothetical protein 
Protein accessionYP_001858707 
Protein GI186477237 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.568242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCAAA ACAGTCCGAT CCTCACGCCG TACCAGCGCC GCGCCTTTAT CTGGCTTGCC 
ATTGCGCTTG CCGTGGGCAT TCTGCTCTGG CTGTTGAGCC CTGTGCTCAC GCCGTTCCTG
CTCGGCGCGA TTCTCGCGTA TATCCTGCAG CCCGGCGTCG CGTGGATGAC GCGCCGCCGC
GTACCGCGCG GCCTCGCCGC GTCGCTGATG ATCCTGTTCT TCGTCGCGAT CGTCACGCTG
CTCGGGCTGC TCGTGCTGGG CGTGATCCAG AAGGAAGTGC CGCAGCTCAA GCAGCAAGTG
CCCATGTTTT TCTCGCACCT GCATGGCTGG CTCACGCCGA AACTTGCCGT GCTGGGCGTG
AGCGACTCGC TCGATTTCGC CAGCATCCGC GACATGGTGA TGGGCCAGCT CGAAGGCAGC
GCGCAGACGG TCGCGCTCTA TGCGTGGACG TCGATACGCA CCAGTTCGAA TGTGATGATC
ACGGTGGTCG GCAACGTGGT GATGGTTCCG CTCGTGCTGT TCTATCTGCT GTACGACTGG
AACGCGATGC TCGCGCGCGT GCGCGGCTTC ATTCCCCGCC GCTGGTTCGC CAAGACGATC
CATCTGGCAC GCGACATGGA TCACATGCTG TCGCAATACC TGCGCGGCCA GCTGCTCGTG
ATGGGCGTGC TCGCGGTGTT CTACGCGGCC GCGCTGTATA TCGCCGGTTT CGAAATTGCG
CTCCCCGTCG GCATCTTTAC GGGGCTCGCG GTGTTTATAC CGTATCTCGG CTTCGCGACG
GGCCTCGTGC TCGCGCTCCT CGCCGCGTTG CTGCAGTTCG GCAACTGGTA CGGCTTCGGC
GCCGTCGCGG TGATCTACGG CGTGGGTCAG ATCCTCGAAA GTTTCTTCCT GACGCCGCGG
CTCGTCGGCG AACGGATCGG TCTGCATCCG CTCGCGGTGA TCTTCGCGCT GCTCGCGTTC
GGCCAGCTGT TCGGCTTTTT CGGCGTGCTG CTCGCGCTGC CCGTCAGCGC GATGCTCTCC
GTCGCGTTTC ACGAGCTGCG GCAGAGCTAT CTGTCGAGTT CGCTTTACAA GAACTGA
 
Protein sequence
MQQNSPILTP YQRRAFIWLA IALAVGILLW LLSPVLTPFL LGAILAYILQ PGVAWMTRRR 
VPRGLAASLM ILFFVAIVTL LGLLVLGVIQ KEVPQLKQQV PMFFSHLHGW LTPKLAVLGV
SDSLDFASIR DMVMGQLEGS AQTVALYAWT SIRTSSNVMI TVVGNVVMVP LVLFYLLYDW
NAMLARVRGF IPRRWFAKTI HLARDMDHML SQYLRGQLLV MGVLAVFYAA ALYIAGFEIA
LPVGIFTGLA VFIPYLGFAT GLVLALLAAL LQFGNWYGFG AVAVIYGVGQ ILESFFLTPR
LVGERIGLHP LAVIFALLAF GQLFGFFGVL LALPVSAMLS VAFHELRQSY LSSSLYKN