| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2419 |
|---|
| Symbol | |
|---|
| ID | 6243905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 2720232 |
|---|
| End bp | 2721260 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642594210 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001858640 |
|---|
| Protein GI | 186477170 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.349153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAG ACACCGCCGC TTCACTCGAT ATCTGGCTCG TGCGCGTGCT GCGCACGCTG
CTCGTCGAGC GCAGCGTCAC GCAGACAGCA CTTCGCCTGA ACCAGACACA GCCCGCCATC
AGCACTGCGC TGCGCAAGCT GCGCGAAACG CTGAACGATC CGATTCTCGT GCGCGGCAAG
TCGGGCATGG TGCCGACGGA ATATGGCGAA TCACTGCTCG CCGCCGCGCA GAAGGTGCTG
CGCGACGTCG ACTTCGTCGC GACGCCGCAC GGCGACTTCG ACCCGGCACG CTCGCGGCGC
ACGTTCCGCA TTGCCGCGCC CGATTACCTG AACGACTTCT TCATGCCGAC CGTGATCGCC
CAGTTCCGCG AGACGGCGCC GCATGCGCGG CTCGAGATCG AGTCGCTCGG TCCGCTTTTC
GATCACACCT GTGCACTCGA TGCGGGCGAA CTCGATCTCG TCATCGGCAA CTGGCCGAAG
CCCGACTTGC GCTTCGAGCG CAGCGATCTC TTCTCGGATA CCGTCGTGTG CATGATGCGC
GCCGATCATC CGCTGGCGAA GGCGCCGCTC ACGCGCGATG CGTATCTCGC CGCGCCGCAT
CTCGCGCCCG CGCATTACAG CGGCGCGCGC GGCGGCGCGA TCGACACGGG CTTCGCGCGC
GCGCGCGCGT CGCGCCGCAT CGTCGCGACG TTGCCGTACT TCGGTCTCGT GCCGCAGGTG
CTGCTGCAAT CGGATCTGAT CTTTACGACG ACGCGCCGCT TTGCACTTCA CTATGCGGCG
ATGTTGCCGC TGGCCGTGGT CGACGTACCG ATTCCGTTTC CGCGCATCAA GTGTTATCAG
ATGTGGCATC CGCAACCGGA CCGGCCAAGC GATATTGCAT GGCTGCGCGG CCTGATGGCG
CAGGTGTCGG ACATGCTCGT GGCGAAGAAG CCGCGGCGCG CAAGGGCGGC GGCGAAGCAA
GCGACGGCGG AAAAAAAAGC GGGCGCAGCC AGTGTGCCCG CCGCGCCCGC TGGAGGAAGC
GGTCAGTGA
|
|---|
| Protein sequence | MDEDTAASLD IWLVRVLRTL LVERSVTQTA LRLNQTQPAI STALRKLRET LNDPILVRGK
SGMVPTEYGE SLLAAAQKVL RDVDFVATPH GDFDPARSRR TFRIAAPDYL NDFFMPTVIA
QFRETAPHAR LEIESLGPLF DHTCALDAGE LDLVIGNWPK PDLRFERSDL FSDTVVCMMR
ADHPLAKAPL TRDAYLAAPH LAPAHYSGAR GGAIDTGFAR ARASRRIVAT LPYFGLVPQV
LLQSDLIFTT TRRFALHYAA MLPLAVVDVP IPFPRIKCYQ MWHPQPDRPS DIAWLRGLMA
QVSDMLVAKK PRRARAAAKQ ATAEKKAGAA SVPAAPAGGS GQ
|
|---|
| |