Gene Bphy_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2188 
Symbol 
ID6243674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2456417 
End bp2457037 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID642593979 
Productsuperoxide dismutase copper/zinc binding 
Protein accessionYP_001858409 
Protein GI186476939 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2032] Cu/Zn superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0161821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.256851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCCT GCTCGCGGTA TCATGTCGGC TTCATCAGGT CCGGCAACGC GGTCGCGGGG 
ACGGCCGGCG CTCGACAAGA GGATCGCATG AAAAAACGAA TCGGCGGCGA GGCGATCAAG
ACCATCGTCG TCCTGGCTGT GACCAGCGCC CTGCTGTCAG GGTGCATGGG TTTCCTGAAG
CCACAGGAGA AACGCGCAGA CGCGCAAATG CTGCCGACGC TGGGCAACCA GGCGCGCGGC
ATGGTCACGT TCATCGAGCG TGCCGACGGC GTTCAGGTCA CCTACAATCT CACAGGCCTG
CCGCCGAACA GCGATCACGC GCTGCAGGTT CATGAACGCG GTGACTGCAA TTCCGCCGAC
GGATCGGGCG CGGGCGCCGT GTTCGCACCG GCGGCCGAAC GTCTGAAGTC GGGCGCGCGC
GTCGAAGGCG ATCTCGGCAA TATTCATGCT GATGCAGCTG GCGTGGCGGC GGGTTTCATC
GTCGCGCCGG ACGTGTCGCT CGACGGCGTG CGCTCGGTGT TGCAGCGCGC CGTGCTGCTG
CATCGCGAAC CCTCCGACCC TTACGCCTAT CCGCAGCACG GCGCCGGTTC TGCGCTCGCG
TGCGGGCTGA TCCGCCAGTA A
 
Protein sequence
MRPCSRYHVG FIRSGNAVAG TAGARQEDRM KKRIGGEAIK TIVVLAVTSA LLSGCMGFLK 
PQEKRADAQM LPTLGNQARG MVTFIERADG VQVTYNLTGL PPNSDHALQV HERGDCNSAD
GSGAGAVFAP AAERLKSGAR VEGDLGNIHA DAAGVAAGFI VAPDVSLDGV RSVLQRAVLL
HREPSDPYAY PQHGAGSALA CGLIRQ