| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1885 |
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| Symbol | |
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| ID | 6243374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2142519 |
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| End bp | 2143397 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642593673 |
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| Product | peptidase S49 |
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| Protein accession | YP_001858110 |
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| Protein GI | 186476640 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000000297327 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACCT ATCCGTTTGC AGCGGCGCGC GTGTTTGACG TGCCGCTGGC GATCCACCCC
ACCAAGGGAC AGGTGATTGC GAAGGTGCTC GCCGGTCGAT TCGGAATTTC CGATGTCGAG
TTCGCCGGCG AAGCGCCGGT TTTCGTGAAG CCGATGGCTT ACGACGAGTG GGACGACGGC
CCGAGCGAGC AATACGAAGA GACGCCGTAT GACCTGACGC AGGGGGTTGC GGTCATCGAC
GTGTCGGGCA CGCTCGTCCA GAAAAGCAGC AACCTTCGGC CGTATTCGGG GATGCTCGGT
TACAACGCAA TCCGCCACAA CTTCCTTGCC GCGCTAGATG ACAAGAAAGT GAAGGCGATC
GTGCTGTCGA TCGACTCGCC AGGCGGTGAA GTGGCTGGCT GCTTCGATTT AGCCGACCTG
ATCTACGAAT CGCGCAGCGT CAAGCCAACG CTTGCGATCC TGAACGAGTC CGGGTACAGC
GCTGCTTATG CGCTCGCAAG CGCATGCGAG CAGATCACGG TCCCGCGGAC AGGCGGCACG
GGCAGTGTCG GAGTGATCTG CATGCACGTA GATCAGAGCA AGGCAATCGA CAAGGCTGGG
CTGACCGTCA CGATCATCAA ATACGGTGAT CGCAAGGCCG ACGGCAATCA GTTCAACCCG
CTCTCGAAAG AGGCGCTCGA CCGGTACCAG GCCGAAGTCG ATGAAATGGG CGAACTCTTC
GTTCAGACGG TCGCTCGCAA TCGCAACCTT TCCGCCGACG TCGTTCGAAA GACGCAGGCA
ACCACCTTTC TCGGTGCCGC TGGTGTCGAG ATCGGCTTCG CTGACGCCGT GATGGCGCCC
GACGAAGCGT TTCGCTCCCT GCTCAAAGAG CTGGGCTGA
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| Protein sequence | MKTYPFAAAR VFDVPLAIHP TKGQVIAKVL AGRFGISDVE FAGEAPVFVK PMAYDEWDDG
PSEQYEETPY DLTQGVAVID VSGTLVQKSS NLRPYSGMLG YNAIRHNFLA ALDDKKVKAI
VLSIDSPGGE VAGCFDLADL IYESRSVKPT LAILNESGYS AAYALASACE QITVPRTGGT
GSVGVICMHV DQSKAIDKAG LTVTIIKYGD RKADGNQFNP LSKEALDRYQ AEVDEMGELF
VQTVARNRNL SADVVRKTQA TTFLGAAGVE IGFADAVMAP DEAFRSLLKE LG
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