| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1564 |
|---|
| Symbol | |
|---|
| ID | 6243055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 1772303 |
|---|
| End bp | 1772848 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642593350 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001857792 |
|---|
| Protein GI | 186476322 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCTC TGGATTATCA AACCGCTTTT CACCTTGCGC CGATCGGCCT CGTGCTGGCG
CGCGACCGGA TCATCGAAGA CTGCAACGAA CAGCTTGCCG CGATTTTCGG CCGTACGCGC
GAGTCGCTGC TCGGGCAGTC GTTCGCGGTG CTCTATCCAT CGTCCGACGA GTTCGAGCGT
ATCGGCGAGC GCATACCGCC CATCATGACG GCGCAAGGCA GTTACGCCGA CGACCGCATC
ATGAAGCGCG CGAACGGCGA ACTCTTCTGG TGCCACGTGA CGGGGCGCTC GCTCGATCTG
TCGGTCCCGC ATGCGGCGGG CGTCTGGACG TTCGAAGACT TGAGCGCCAC GCGGCGCGTC
GCGGTGGAGC TGACGCCGCG TGAACGCGAG ATCGCCGCGC AACTGGTGAC GGGAAAAACC
AGCAAGCAGA TTGGACGGAT TCTCGACATC AGTTCGCGAA CCGTCGACGT TTACCGCGCG
CGCCTGATGC GCAAGTACGG CACGGGCAAC GCGACGGAAC TGCTGCAGCG TCTGCTCGGG
AACTGA
|
|---|
| Protein sequence | MPALDYQTAF HLAPIGLVLA RDRIIEDCNE QLAAIFGRTR ESLLGQSFAV LYPSSDEFER
IGERIPPIMT AQGSYADDRI MKRANGELFW CHVTGRSLDL SVPHAAGVWT FEDLSATRRV
AVELTPRERE IAAQLVTGKT SKQIGRILDI SSRTVDVYRA RLMRKYGTGN ATELLQRLLG
N
|
|---|
| |