Gene Bphy_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1548 
Symbol 
ID6243039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1749979 
End bp1751049 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content65% 
IMG OID642593332 
Producthypothetical protein 
Protein accessionYP_001857776 
Protein GI186476306 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAC GTCATAGCGC GGCCTTCACG GCCATTCTCG CAGCGGCGCT CTTCGGCGCG 
ACGACGCCGT TCGCCAAGGC GCTGCTCGGG GCACTGTCGC CGTTCCTGGT GGCGGGCCTG
TTCTACCTCG GCAGCGGGTG CGGGCTTGCC ATGGCGATGC TCGTTCGACG TTGGCGGCAA
AAGCCGGAGG CGAGCGAGCA GGCGGCACTC GCCATGCCGC TCGACGAACT GCCGTGGCTG
ATAGGCGCAA TCATCGCAGG CGGTATCGCG GGGCCTGCGC TGCTGATGTT CGGGCTCAGC
ACGACGCCGG CCGCGACCAC CTCGTTGCTG CTGAATCTCG AAGGCGTGTT CACGGCGCTG
ATCGCCTGGT TCGTGTTTCG TGAGAACGTC GATACGCAGG TCTTCCTCGG CATGATGGCG
ATCGTCGCCG GCGGCGCACT GCTGTCGTGG CAGCCCGGCG AGGGCGGTGC GGGTATCGGC
GCGCTGCTGG TCGCCGGCGC GTGTCTGTGC TGGGCCATCG ACAACAATCT GACGCGCAAG
GTGTCGAACA ACGACGCGAT GTTCATCGCC TGCGTCAAAG GGCTGGTGGC CGGCGTCGTG
AATACGGGCA TCGCGCTGTG GCTGCAAGCA CCTGTTCCGG AGCCCGTGCT GATCGGCGCG
TCGATGTTCG CGGGTCTGGC TGGTTACGGC GTGAGCCTCG TGCTGTTCGT CGTCGCGCTG
CGTCATCTGG GAAGTGCGCG CACGGGTGCG TATTTTTCCG TGGCCCCATT ATTTGGCGTC
GCGATCTCGT TTGCGCTGTG GCCCGAACAA CCGCCGCTGT CGTTCTGGAT CGCGACGGTG
CTGATGGCGC TCGGCGTCTG GCTGCATCTG CGTGAGCGTC ACGTGCACGA GCACACGCAC
GAGCCGCTCG AACACAATCA TCGGCACCGA CATGATGAAC ATCATCAACA CGCACACGAT
TTCGAGTGGG ACGGAGTAGA GCCACATGTT CACCCGCATC GGCATGCGCC CATCACGCAC
ACGCACGCGC ACTTTCCCGA TATCCACCAC CGGCATCGGC ACCGGCACTG A
 
Protein sequence
MNTRHSAAFT AILAAALFGA TTPFAKALLG ALSPFLVAGL FYLGSGCGLA MAMLVRRWRQ 
KPEASEQAAL AMPLDELPWL IGAIIAGGIA GPALLMFGLS TTPAATTSLL LNLEGVFTAL
IAWFVFRENV DTQVFLGMMA IVAGGALLSW QPGEGGAGIG ALLVAGACLC WAIDNNLTRK
VSNNDAMFIA CVKGLVAGVV NTGIALWLQA PVPEPVLIGA SMFAGLAGYG VSLVLFVVAL
RHLGSARTGA YFSVAPLFGV AISFALWPEQ PPLSFWIATV LMALGVWLHL RERHVHEHTH
EPLEHNHRHR HDEHHQHAHD FEWDGVEPHV HPHRHAPITH THAHFPDIHH RHRHRH