| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1341 |
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| Symbol | |
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| ID | 6242832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 1502266 |
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| End bp | 1504140 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642593118 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001857569 |
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| Protein GI | 186476099 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.358627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTCA AACTGACAGC CAAGCATCCG CGGCCGGCTT CGTCCGAACG CGCCCCTGTG
CGTTCGGGCA GCACGACTGC CCGCAAGCCG ACTCGGCCGG CCGCCCCGGC AGACAAACCC
GCTGCGCAGA GGAAGCCGCG CAGCGACGCC GGTTCGGCGG CGGGCGCACC CGCTGCACGC
CGTGGCACCG CTTCGGGCGA AGGGACAAAG CGCCCGGCCA CGAGGAGCAA CGCGGCCGGC
GCGCCGGGGG AGCGGCGCGG CCCGTCGACG GGCGGGCGCA ACGGCGCGCC CGCTCGCTCC
GGCGACCGTC CGGCGCGCGC CGCGGGCACG GGCTCACGCG AGCGCGGCCT TGCCGAACGT
GGCGCTTCCG CTTCGTTCGA TCGCCGTCCG CCGGGCGATC GGCCGGCACG CAAGGAAGGC
GCTTCCGCCG GCACGGGTTT CCGTCGGGAC GGGGACGCGC GAACCAACGC GCGCACTTCG
TCAGATCGTC CGTCGCGCAG CGGCGCGGCG TCGCGTGCTG GCGAACGCGC ACCGCGCTTC
TCCCGTGACG ACGATGCACG GGTCGCACGA CGTACGGCGC CCGACAGCGA TGACGGCCGG
CGCGCTCCGC GCCCGCCGCG AGAGAGCGAT GACGTTCGCC GCGCGCCGCG CACGGCGCGT
ACCGAAGGTA CGCCTTCGCG CGAACGCACG GAACGACGCT ACCGTGACGA CGCCCCCGAA
GGCCGCACGA CGCGCTCGCC GCGCGGCGAG CGATCCGAAG CACGCGGTGA ACGCAGCTAT
GCGCGCCCGG CCAGGGCTGC CTACGAAGAT CGCGGCGCAG CGCCGGAACG CCGCCCACGC
GGCGAAGGTG CACCGCGCCG CAGCCGCGAA GACGTCGCAG AAGGTCGCAG CGAACGCACT
TACGCAAAGC CCGTGAAGGC CGTCTACGCG GACCGCGCCA GCGACGCTCC GCCGAAGGCC
GCACCGCGCG CCACGAAGAC CAAACGCGAC ACCCGCTCGG TCGAAGACAG CTTTGACCGT
CCGGCGCGCT TCGACCGCCC CGCTGAAAAG ACGTCACGCA AGCCCCGCCC GGCCGCCGCG
TCGCGTCAAC GCGACGAAGG CGAATACAAC GACGCCCCCG GCAATCTGCG CCTGTCGAAA
CTGATGTCCG AACTCGGCCT GTGCTCGCGC CGCGAAGCCG ACGAATGGAT CGAAAAAGGC
TGGGTTACCG TCGACGGCGT CGTCGTCGAT AAGCTGGGCA CGAAGGTCCG CCCCGACGCC
GATATCCAGA TCGACCCGGC CGCTCAGGCA GCCCAACAGA AACAGGTGAC GATCCTCGTG
CACAAGCCGG TCGGCTATGT GTCGGGTCAG GCGGAAGATG GCTACGAGCC TGCCGTGACG
CTCGTCAAAC CGGAGAACCG CTGGGACGGC GACCGTACTG ATATCCGTTT CTCGGCTGTC
CATTTGCGAC AACTGGCGCC TGCGGGACGC CTCGATATCG ATTCGACGGG GCTGCTCGTG
CTGACTCAGG ACGGCCGCAT CGCGAAGCAG CTGATCGGCG GGCACTCGGA GATCGACAAG
GAGTATCTGG TGCGCGTCAG CTACGGCGAC ATCGAAACGG ACGTCGAGCA TGAGTTCCCC
GCCGAGAGTC TGGCCAAACT GCGCCACGGC CTCGAACTCG ACGGCGTGCC GCTCAAACCC
GCTATGGTCA GCTGGCAAAA CGGCGAGCAA TTGCGCTTCG TGCTGCGTGA AGGCAAGAAA
CGCCAGATTC GCCGGATGTG CGAACTGGTC GGGCTGCATG TCGTGGGCCT CAAGCGCGTG
CGGATGGGCC ACGTGATGCT CGGCGCCTTG CCGCCCGGAC AGTGGCGCTA CCTCGGTCCG
GACGAGTCGT TCTAA
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| Protein sequence | MRVKLTAKHP RPASSERAPV RSGSTTARKP TRPAAPADKP AAQRKPRSDA GSAAGAPAAR
RGTASGEGTK RPATRSNAAG APGERRGPST GGRNGAPARS GDRPARAAGT GSRERGLAER
GASASFDRRP PGDRPARKEG ASAGTGFRRD GDARTNARTS SDRPSRSGAA SRAGERAPRF
SRDDDARVAR RTAPDSDDGR RAPRPPRESD DVRRAPRTAR TEGTPSRERT ERRYRDDAPE
GRTTRSPRGE RSEARGERSY ARPARAAYED RGAAPERRPR GEGAPRRSRE DVAEGRSERT
YAKPVKAVYA DRASDAPPKA APRATKTKRD TRSVEDSFDR PARFDRPAEK TSRKPRPAAA
SRQRDEGEYN DAPGNLRLSK LMSELGLCSR READEWIEKG WVTVDGVVVD KLGTKVRPDA
DIQIDPAAQA AQQKQVTILV HKPVGYVSGQ AEDGYEPAVT LVKPENRWDG DRTDIRFSAV
HLRQLAPAGR LDIDSTGLLV LTQDGRIAKQ LIGGHSEIDK EYLVRVSYGD IETDVEHEFP
AESLAKLRHG LELDGVPLKP AMVSWQNGEQ LRFVLREGKK RQIRRMCELV GLHVVGLKRV
RMGHVMLGAL PPGQWRYLGP DESF
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