Gene Bphy_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1231 
Symbol 
ID6242723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1381332 
End bp1382093 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID642593009 
Productputative hydratase/decarboxylase 
Protein accessionYP_001857460 
Protein GI186475990 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.2162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.357566 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATC ACGACCTCGC GCAACGCCTC GTGCTTGCGC GCCGCCAGCA CCGCGCCATC 
GACACGCTGC CGCTCGACTC CCTCCCGCCC GATGCAGCTA CCGCCTACGC CATCCAGCAG
GCGGTGATCG CGGGGCTGGG CGGGGAAACA GGCGCCTGGA AAATCGGTGC CAAAGCTCCC
GGCGGTCCCG CCTCGGGCGC GCCGATTCCG GCCGCGCTGA CGGTCGCGTC GCCGGCCCGT
CTCGAACACG GTTCGTTTTT CCGCGTGCTG CTGGAACTGG AAGTCGCGTT CCGCTTCGCC
GAGCCGATCG CGCCTCACGG GCAGGCGTAT GCACGTGACG AGGTGCTCGC GCGCGTCGGC
TCCGTCTTGC CGACCATCGA AATCGTGGAC AGCCGCTTCG CCGAATGGCC GAACGTCGCG
CCGCTCGCAC AGCTCGCCGA TGCGCAGAAC AACGGCGCGC TCGTGACGGG CCATGCCGTG
TCTTACGCGT CGATCGCGCG CTCGTTCGAT TTCGTTTCGC CGGAACTCGA ATTAACCTTT
GACGGCAAGT CGCTCGTGCC CCAATCGCCC GGCAATCCCG CAGGCGATCC GCGCGAACTG
CTCGTGTGGT TCGTCAACCA TTGCGCCGCG ATGGGTATCA CGATCCAGCC GGACTGGATC
ATCACGACGG GCTCTTATGT GGGCGCGCAT CGCGTCGACG GCCCCGGAAC CGTATACGGC
CATATCGACG GACTGGGCGA AGTCGAAGTC GAATTGACGT AA
 
Protein sequence
MTDHDLAQRL VLARRQHRAI DTLPLDSLPP DAATAYAIQQ AVIAGLGGET GAWKIGAKAP 
GGPASGAPIP AALTVASPAR LEHGSFFRVL LELEVAFRFA EPIAPHGQAY ARDEVLARVG
SVLPTIEIVD SRFAEWPNVA PLAQLADAQN NGALVTGHAV SYASIARSFD FVSPELELTF
DGKSLVPQSP GNPAGDPREL LVWFVNHCAA MGITIQPDWI ITTGSYVGAH RVDGPGTVYG
HIDGLGEVEV ELT