| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1161 |
|---|
| Symbol | |
|---|
| ID | 6242659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 1301894 |
|---|
| End bp | 1302964 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642592940 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001857396 |
|---|
| Protein GI | 186475926 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.580362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCG ATTTGCCGCA AGCACTGAAA GAAGCGATCC AGTTTTCGAT CGATCACGAA
TCGCCGTGGG ACCGCAATGC CGATGGCAAG TTCGGCGTAC ATGTGAACGA CCCGCCGCCG
TGGAATCGCC TGCTCGGGCC GATTCACGAC CGGGGGCCGG TATCGGGTGC AGTGGCCGTC
GATGGCCGGC TGCTTGCGAC ATGGGGCGAA CCGGATCGCG CCGACCTGAC CTTCAGCATC
GCAAAGACGT ATCTCGCGCT GCTGGCCGGC GTCGCGCACG ATCGCGGCCT GCTGCCCGAT
CCCGACGAGC CGGTGCGTGT GCGCGTGCCG GGCGTCGGTT TCGACGACGA GCACAATGCG
CCCATCACAT GGACGCACCT GCTGCAACAG ACGAGCGAAT GGCAAGGCAC GTGCTTCGGC
TTGTCCGATC AGGCGGATCA CTATCGCGCG GTGACCTTCG GCGATCCGCC CGCCGGCCGC
AAAGGCGAGC CGCGCGGGCT GCAACCGCCG GGTACGTACT GGGAATACAA CGACGTACGC
ATCAATCAGT TGTCGCTCGC GCTGCTGCAT CTGCTCGGCA GGCCTTTGCC CGATGTGTTC
CGCGAAGCTA TCATACGGCC CGTGGGCGCA AGCGAGCACT GGCAATGGGT CGGCTATGAC
GACGCGTGGC TCGACCTCGG CGGCCGCCGT GTGCAGTCGG TGCCAGGCGG CTCGCACTGG
GGCGGCGGCA TGTCGGTGAG CGCGAACGAT CAGTTGAAAG TCGCGCAGAT GCTGCTCGAC
GACGGGCTTG CCGACGGACG CCGCGTGCTA TCGGCTGAAT GGATCGCGCG GATGCGCGCG
CCGTGCACGC TCGCGCCGTA CTACGGGTAT CTGGTGTGGC TTAATACTTC GCGGCGGGTG
TTTCCCGCCG TGCCGGAATC GAGTTACTTC GGCGTCGGCG CGGGCAGTTC GTTCATGTGG
ATCGAGCCGG AGCGGCGCAT CGCGCTGATC GTGCGTTGGC TCGATTCGCA GTTCGCGGAC
GCGTTCTTCG GGAAGGTGCT GAACGCCATC GAGACAGTGT GTTCGCGATA G
|
|---|
| Protein sequence | MQADLPQALK EAIQFSIDHE SPWDRNADGK FGVHVNDPPP WNRLLGPIHD RGPVSGAVAV
DGRLLATWGE PDRADLTFSI AKTYLALLAG VAHDRGLLPD PDEPVRVRVP GVGFDDEHNA
PITWTHLLQQ TSEWQGTCFG LSDQADHYRA VTFGDPPAGR KGEPRGLQPP GTYWEYNDVR
INQLSLALLH LLGRPLPDVF REAIIRPVGA SEHWQWVGYD DAWLDLGGRR VQSVPGGSHW
GGGMSVSAND QLKVAQMLLD DGLADGRRVL SAEWIARMRA PCTLAPYYGY LVWLNTSRRV
FPAVPESSYF GVGAGSSFMW IEPERRIALI VRWLDSQFAD AFFGKVLNAI ETVCSR
|
|---|
| |