Gene Bphy_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1159 
Symbol 
ID6242657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1299110 
End bp1300531 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content67% 
IMG OID642592938 
Producthypothetical protein 
Protein accessionYP_001857394 
Protein GI186475924 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTCGTG ATATCGCCAT TCGAAACGCG GCCGGCCAGT ACGATTCCGG CCGTTTTCTC 
GACGACTTGC GGCGCCGCGT CGCGTATCGC ACGGAAAGCC AGGAAGCCGA CAGCGGCGCA
CGGCTGCAAG GCTATCTCGA CGAAGAGCTG ACGCCGCTGC TCACGCAATG GGGCTTTACC
TGCCGCGTTG TCGACAATCC CGCGAAAGAC GCAGGCCCGT TCCTGATCGC GCACCGTCAC
GAAGACGACG CGCTGCCGAC CGTCCTCAGC TACGGCCACG GTGACGTAGT TCGCGGTTAC
GACGCGCAGT GGCGCGACGG CCTCTCGCCG TGGGACGTGA CCGTCGACGG TGAACGCTGG
TACGGCCGCG GCACGGCCGA CAACAAGGGC CAGCACAGCA TCAATCTCGC CGCGCTGAAA
GCCGTGCTCG ACGCGCGCGG CGGCAAGCTC GGCTTCAATC TGAAACTGCT GTTCGAAACG
GGCGAGGAAG TCGGCTCGCC GGGGCTGCAT GCGCTGTGCA CCCAACTGCG CGACGAACTC
TCGGCCGACG TGCTGATCGC ATCCGACGGC CCGCGCCTGT CCGCGCATCG CCCGACGCTC
TTTCTCGGCT CACGCGGACT CGTCAATTTC AAGCTCGAAC TGACGCTGCG CGATGGCGGC
CACCATTCCG GCAACTGGGG CGGCCTGCTG CGCAACCCCG GCATCGTGCT CGCGAATGCG
ATCGCATCGA TGGTCGACGC GAACGGCAAG ATCCTGATCG ACGGGCTGCG TCCGCCGCCC
ATTCCCGACG CCGTGCGCCG TGCCTTGTCC GGCATCGGCG TGGGCGGCAA TCCGGGCGAG
CCGAGCGTCG ATACCGACTA CGGCGAGCCG GGCCTCACGC CGACCGAGCG CGTGTTCGGC
TGGAACAACC TCGAAGTGCT CGCGTTTCGC ACGGGCAACC CCGACAAGCC TGTCAACGCG
ATTCCGCCGT CGGCCGTCGC GTTCATGCAG CTCCGCTTCG TGGTCGGCAC GGACTGGCGG
AACCTGGAAT CGATCGTGCG CCGGCATCTC GACGAACACG GCTTCGGCAT GATCGAACTC
GACGTGGAGC GCGGCGCGCC CGCCACCCGC GTCGATCCCG ATAACGCATG GGTGCAATGG
GCGCTGCGCT CGCTGCGCCA CACGACGGGC GACGAACCCG TGCTGCTGCC GAACCTCGGC
GGCACGCTGC CCAACGACGT ATTTGCCGAC GTGCTCCGCA TGCCGACGCT GTGGGTGCCG
CATTCGTACC CCGGCTGCTC GCAGCACGCG CCGAACGAGC ATCTGCTCGG CCCGGTCGTG
CGCGATGGGC TGCGCATCAT GGCCGGTCTC TTCTGGGACC TGGGCGCCCA CGAAGCCGGT
GCAACCAATC CCGCTCCGCA TGTTTCGACC ACCCCAGCCT GA
 
Protein sequence
MTRDIAIRNA AGQYDSGRFL DDLRRRVAYR TESQEADSGA RLQGYLDEEL TPLLTQWGFT 
CRVVDNPAKD AGPFLIAHRH EDDALPTVLS YGHGDVVRGY DAQWRDGLSP WDVTVDGERW
YGRGTADNKG QHSINLAALK AVLDARGGKL GFNLKLLFET GEEVGSPGLH ALCTQLRDEL
SADVLIASDG PRLSAHRPTL FLGSRGLVNF KLELTLRDGG HHSGNWGGLL RNPGIVLANA
IASMVDANGK ILIDGLRPPP IPDAVRRALS GIGVGGNPGE PSVDTDYGEP GLTPTERVFG
WNNLEVLAFR TGNPDKPVNA IPPSAVAFMQ LRFVVGTDWR NLESIVRRHL DEHGFGMIEL
DVERGAPATR VDPDNAWVQW ALRSLRHTTG DEPVLLPNLG GTLPNDVFAD VLRMPTLWVP
HSYPGCSQHA PNEHLLGPVV RDGLRIMAGL FWDLGAHEAG ATNPAPHVST TPA