Gene Bphy_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1148 
Symbol 
ID6242646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1288145 
End bp1288939 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID642592927 
ProductABC transporter related 
Protein accessionYP_001857383 
Protein GI186475913 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGT TGCCCTTGTC GTCGTCCACC TCGCCGGCTC TGGCGTTGCG CGCAGAAGAT 
ATCGTCAAGC GTTTCGGCGC GGTGACGGCG CTCGACGGCG TATCGCTATC GCTGCGGCAG
GGCGAAATTC TGGGGATTCT GGGCGACAAC GGCGCGGGCA AATCGACGCT CATCAAGATT
CTCACAGGCT TTCATCAGCA GACGAGCGGC AAGCTTTTTC TCGGCGACGA CGAGACCTTG
CTGCGTTCGG TCGATCATGC ACGCGCGCTC GGTATCGAAT GTGTCTATCA GGATCTCGCG
CTCGCCAACT CGCTCAGCAT CTATCACAAC ATGTTTCTGA ACCGGGAGAT CGTCCGTCCC
GGTCCGTTCC GCCTGCTCAA CCACAAGGCG ATGCGAGCGC GAGCGGCGGA ATGCCTCGAA
GAGATCGGCG TACATGTGCC TTCCGTGGAC CTGCCCGTCG AGCAGTTGTC GGGCGGCCAA
AGGCAGGCCA TTGCCGTCGC GCGGGCGGTC AATTCGAACG CGAAGATCCT GTTGCTCGAC
GAACCGCTTG CCGCGATGGG CGCGCGCGAG GCGGGGCTGA TCATCGACCT GATTTTGCGG
CTCAAGGAGA AGGGCGGTCT GTCGATCATC ATGATCATGC ACAACTACGC GCAGACACTC
GATATCGCGG ACCGCGTGAT GCTGATGCAG CGCGGACGCG TGACGTATGA GCGGGAGTCG
GTCAGCACGT CCGTTGCTGA ATTGATGGAT ATCGTGCGCC GGGAGTATCG GGCGATGCGG
GGCCAGACGT CGTAA
 
Protein sequence
MSSLPLSSST SPALALRAED IVKRFGAVTA LDGVSLSLRQ GEILGILGDN GAGKSTLIKI 
LTGFHQQTSG KLFLGDDETL LRSVDHARAL GIECVYQDLA LANSLSIYHN MFLNREIVRP
GPFRLLNHKA MRARAAECLE EIGVHVPSVD LPVEQLSGGQ RQAIAVARAV NSNAKILLLD
EPLAAMGARE AGLIIDLILR LKEKGGLSII MIMHNYAQTL DIADRVMLMQ RGRVTYERES
VSTSVAELMD IVRREYRAMR GQTS