| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1082 |
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| Symbol | |
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| ID | 6242580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 1219304 |
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| End bp | 1220521 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642592861 |
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| Product | porin |
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| Protein accession | YP_001857317 |
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| Protein GI | 186475847 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.464174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC GTTACCCCGA AGTCAAGCTC GCGCTGGCTT GCGCAGCCGT GCTGGCCGCG
ATGCCCGCCT TCGCGCAGAA CAGCGTGACG CTGTACGGCA TCGTCGATAA CGGTATCGGT
TATCAGTCGA GCTCGACGAC GCTCGGTTCG ACCTCGGGCG GCCACTCGGC CGTCAAGATG
GTCACGGGCG TGTGGGCGGG CAGCCGCTTC GGCCTGAAGG GCGCGGAAGA TCTGGGCGGC
GGCACGAAGG CCATCTTCAC GCTGGAAGAG GGTTTCAGCG CCGCCAACGG CGCGATGGCG
ACGAACAACC TGATGTTCAG CCGCCAGGCG TTCGTCGGCG TGACCAACGA CAACTACGGC
TCGCTGACGG CAGGCCGCCA GTACACGTCC TACTACCAGT TGCTGTCGCC GTACAGCCCG
ACGACGTGGC TCACGGGCTT CTATGGCGCG CACGCGGGCG ACGTCGACGG TCTCGACACG
ATCTACCGCG CAAACAACAC GCTGCTGTAC ATGTCGCCGA AACTCTACGG CTTCAAGTTC
AGCGGTTCGT ATTCGTTTGC GGGCGTGCCG GGTAGCGCAT ACCAGGGTTC GACGTGGAGC
ACGGCTGTGC AATACGCGCA GGGCCCCATC GGCATCGCGG TCGGCTTCTC GAAGATCAAC
AACTCGAACG TGAACGGCGG CACCTTCGGC ACCGACACGG CGACGTCGAA TGGCGGCGCG
CAGTCGGGTG TGTCGGCCGT GACCAACGGC TACCAGACGG CGCGTGCGCA GCAGCGCTTC
GCGGTCGGCG CGGGCTACAC GTTCAACAGC CAGTTCGACA TCACGGCGAC GTATTCGAAC
GTGCAGTACA TCCCGGGCAT CGGTTCGTCC TACCGCAATC TGGCGATCTG GAATTCGGGC
GGCATCGTGC TGCACTGGAA GCCGACGGCC GCCTGGGACT TCGCGACGGG CTACGCATAC
ACGCGCGCGA CCAAGTCGAA CGGCATCTCG AGCAGCGCGT CGTATTCGCA GGTCAACCTG
TCCGAGTACT ACTCGCTGTC CAAGCGCACG GGCATCTACG CGCTGCAGGC CTATCAGCGC
GCGAACGGCC AGACGCTCGG CACGAACGGC CGCAGCATCA TCAACGCAAC GGCCACGATC
GGCGACGGCT TCAACTCGAC GCCTTCGTCG TCTCGTAGCA TGGTCGGCGT CGGAGCGGGC
ATCATTCACC GCTTCTGA
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| Protein sequence | MKRRYPEVKL ALACAAVLAA MPAFAQNSVT LYGIVDNGIG YQSSSTTLGS TSGGHSAVKM
VTGVWAGSRF GLKGAEDLGG GTKAIFTLEE GFSAANGAMA TNNLMFSRQA FVGVTNDNYG
SLTAGRQYTS YYQLLSPYSP TTWLTGFYGA HAGDVDGLDT IYRANNTLLY MSPKLYGFKF
SGSYSFAGVP GSAYQGSTWS TAVQYAQGPI GIAVGFSKIN NSNVNGGTFG TDTATSNGGA
QSGVSAVTNG YQTARAQQRF AVGAGYTFNS QFDITATYSN VQYIPGIGSS YRNLAIWNSG
GIVLHWKPTA AWDFATGYAY TRATKSNGIS SSASYSQVNL SEYYSLSKRT GIYALQAYQR
ANGQTLGTNG RSIINATATI GDGFNSTPSS SRSMVGVGAG IIHRF
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