Gene Bphy_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0402 
Symbol 
ID6241904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp459747 
End bp460604 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content62% 
IMG OID642592166 
Producthypothetical protein 
Protein accessionYP_001856641 
Protein GI186475171 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.450593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.256851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGT CTTCCAAGCC GCAGCCTGCT GCGGCGCTCG ATAGCCGGCA ACTCGATCTG 
CCGCTCTTCG ACGAGCCGGG CAAAACTGCG GCGCCGCCGC AACCGAAGCC CGCTGCTCCC
CTCGCACCCG ATGGCTCGAA ACTGCGCAGC GTCACGCTCG GCGCGCGCAT GCTGCACTAT
GCACTGAAGC GCTCATCGCG CCGCTCGATT GGCTTTGCGA TCGACAGCAC GGGGCTCACG
ATCACTGCGC CGCGCTGGGT CACACTGAGC GACATCGAAA CCGCGATCGC CGAAAAACAG
CGCTGGATTT TCACGAAACT CGCCGAATGG CAAACGCGCA CGGAACAGCG CGTGATGCCG
CGCGTCGACT GGAAAGATGG TGCTGAGGTG CCGTATCTCG GGCACACCGT ACGTGTGACG
CTTGCGGCAT CGAATGCACT GCTTGCGTAC GATGGCGAAC GCAACGTGCT CGCGCTGCCG
TTGCCGGCGC AAGCCGATCC GCAGCAGATC AAGGATCGCG TGCAGGGGTG GTTGCAGGGC
GAGGCAAAGC GGATCTTCGG CGAGCGGCTC GTTGTGTATG CGGAGAAGCT GGGGGTGACG
TATCGCGCGT ATGCGTTGTC ATCGGCGGCG ACGCGCTGGG GTAGTTGTTC AAGCGACGGG
AAGATCCGGC TCAACTGGCG GCTGATTCAT TTTCCGCTGT CGGTGATCGA CTATGTCGTC
GCACATGAAC TCGCGCATTT GCGCGAGATG AACCATAGTC CGCGGTTCTG GCAGACGGTT
GAATCCATCT TTCCTGAGTT TCGTGAAGCC CGGCAGACGC TTAAGCATCA TCCGCCTGAG
CTCCTGCCTA CGCTTTAG
 
Protein sequence
MQKSSKPQPA AALDSRQLDL PLFDEPGKTA APPQPKPAAP LAPDGSKLRS VTLGARMLHY 
ALKRSSRRSI GFAIDSTGLT ITAPRWVTLS DIETAIAEKQ RWIFTKLAEW QTRTEQRVMP
RVDWKDGAEV PYLGHTVRVT LAASNALLAY DGERNVLALP LPAQADPQQI KDRVQGWLQG
EAKRIFGERL VVYAEKLGVT YRAYALSSAA TRWGSCSSDG KIRLNWRLIH FPLSVIDYVV
AHELAHLREM NHSPRFWQTV ESIFPEFREA RQTLKHHPPE LLPTL