| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0318 |
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| Symbol | |
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| ID | 6241820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 359409 |
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| End bp | 361250 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642592082 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001856557 |
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| Protein GI | 186475087 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0135252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT CCATCGTTAA GCAGTTTCTG AAGCGCCGGG CCCGTGCAAA CAGCGTGCCG
CACGCCGTTT CCGCGCGCCG GTTGCTGGGC GCCGCCGCCC TTGCAGCGTG GACGCTCGCC
GCCTTGCCGG CGCATGCGCA GGATCCGTCG CCCGATACGG ATGACAACTC CGTCTCCGTG
CAGGACGCTT TCGGACCCGA TTCCGCCGAA GAAAAAACCA ATCTGCCCAA CGTCGTGCTG
TCGAGCCAGA TCGTATTCCA GGTGCTCGCT GCGGAAGTGG CGTTGCAACG CAATCAGCCG
GCGCCCGCGT ATCAAACCTA TCTCTCGCTT GCGCGCGACA CGCACGATCC ACGCATGGCG
CAGCGCGCGA CAGAAATCGC GCTAGCCGCA CAGAGCCCGT CCGATGCGCT GGCCGCCGCG
CAACTGTGGC AAGAGTATGC GCCGCAATCG GAACGTGCCG CGCAACTCGA TGCATCGCTG
CTCGTGCTGT CAGGCAAACC AGATGACGCG AAGCCGATGC TTGCCAAAGA ACTTGCGAAG
ATTCCGCCGG AAAACCGCGG CAACGGCATT CTCGCGCTGC AACTGCTGAT TTCCCGCGGA
CCGAATCGCG TGGGCGGCCT GCACGTGCTG CAGGATCTGC TCGCCAACGA CATGAACCGC
CCCGAGGCTC AATTCGCGAT CGCCCGTCAG CAGCTGATCG CGGACGACGC GCCCGGTGCG
CGTAAATCGC TCGAACAGGC GCTCAAGCTG AAGCCCGACT ATCTGCCCGC AGCGTTGATG
CTGTCGCAGA TGGGACCGGA AGAGCGCAAG GAGGGCATCG CATCGCTCGA GAAATACGTC
CAGGCGAATC CGAAATCGCA TGAAGCGCGG CTCGCGCTCG CGCAAATGTA TCTTGCGAGC
GATCGGCTCG ACGACGCACA GAAACAGTTC GAGTTCATGC AAAAGGACAA CCCGAACGAT
CTGACGCCGT TGATGGCACT CGCGCTCATC AAGATCCAGC AAAAGAACCT GCCCGAAGCG
CAGAACTATC TGCAGCAGTA CGCTCAAAAG GCCGAGAAGA CGCCGGGTGC GGATGCGGGC
CAGGCGTACA TCTATCTCGC GCAACTGTCG CTCGAACAGA AGGATACGGC GGGCGCGAGC
CGCTGGCTCG ACAAGATCTC TGCGACGAGC ACGCAGTACA TCCCCGCGCA GATCACGCGT
GCGCAACTGC TTCAACGTCA GGGCAAGGTC GACGATGCGC GCAAGTTGCT CGCCGGCATT
CGCGCGCAGG ATCCGCGCGA GCAGGCGCTA ATCGCACGCA CCGACGCCGC GATTCTGTTC
GACGCAAAGC GCTATCAGGA AGCCGAGACA CGCCTCGCCC AAGCGACGGG CGACTTCCCG
GATGACCCCG ATCTGACGTA TGACTACGCG ATGGCCGCCG AAAAGAACGG CCATTACGAC
GTGATGGAAA CGCAATTGCG CAAGCTGATG CGCACGCAAC CGGATAATGC GCAGGCGTAC
AACGCGCTTG GCTATTCGCT CGCGGACCGC GGACAACGTC TGCAGGAAGC GGACAAGCTG
GTCGAGAAGG CGCTGTCGCT GTCGCCGAAC GATGCGTTCA TCATGGACAG CGTCGGCTGG
GTCAAGTACC GGCTCGGCGA TACGTCGGAT GCGATTCGCG TGCTGCGCAA GGCGTACGAT
CTGCAGCCGA ACGCCGAAAT CGGCGCGCAT CTCGGCGAAG TGCTGTGGAA GAGCGGCGAC
CAGGATCAGG CGCGCGCTGC GTGGCGCGAT GCCCGCAAGC TCGAACCCGA CAACGATACG
CTCGTCAAGA CGCTCAAACG TTTTCAGGTG AACGATCTCT GA
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| Protein sequence | MNLSIVKQFL KRRARANSVP HAVSARRLLG AAALAAWTLA ALPAHAQDPS PDTDDNSVSV
QDAFGPDSAE EKTNLPNVVL SSQIVFQVLA AEVALQRNQP APAYQTYLSL ARDTHDPRMA
QRATEIALAA QSPSDALAAA QLWQEYAPQS ERAAQLDASL LVLSGKPDDA KPMLAKELAK
IPPENRGNGI LALQLLISRG PNRVGGLHVL QDLLANDMNR PEAQFAIARQ QLIADDAPGA
RKSLEQALKL KPDYLPAALM LSQMGPEERK EGIASLEKYV QANPKSHEAR LALAQMYLAS
DRLDDAQKQF EFMQKDNPND LTPLMALALI KIQQKNLPEA QNYLQQYAQK AEKTPGADAG
QAYIYLAQLS LEQKDTAGAS RWLDKISATS TQYIPAQITR AQLLQRQGKV DDARKLLAGI
RAQDPREQAL IARTDAAILF DAKRYQEAET RLAQATGDFP DDPDLTYDYA MAAEKNGHYD
VMETQLRKLM RTQPDNAQAY NALGYSLADR GQRLQEADKL VEKALSLSPN DAFIMDSVGW
VKYRLGDTSD AIRVLRKAYD LQPNAEIGAH LGEVLWKSGD QDQARAAWRD ARKLEPDNDT
LVKTLKRFQV NDL
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