Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0063 |
Symbol | |
ID | 6241567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 72304 |
End bp | 73062 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642591826 |
Product | pyrimidine 5'-nucleotidase |
Protein accession | YP_001856304 |
Protein GI | 186474834 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.264362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCC CTTCCCGTCC GAAGCGCCGT CGGCCGCAGA TTCACGCCGG CACGCCCGTC TGGCTGTTCG ACCTCGACAA CACGCTGCAT CACGCGTCGC ACGCCATCTT TCCGGCCATC AATGCCGCGA TGACGCAGTA CATCGTCGAC ACGCTGCAAG TCGAGCGCGA CGAAGCCAAC CGTCTGCGCA CCGGCTACAC GCAGCGTTAC GGCGCCGCGC TACTGGGCCT CACGCGTCAC CATCCCGTCG ATCCGCATGA CTTCCTTAAA TATGTGCACA CGTTCCCCGA TTTGCGCGCA ATGCTGCGCA GCGAGCGCGG GCTGAAACGT CTCGTCGACG CGCTGCCGGG CCGCAAGATC GTGCTGACCA ACGCGCCCGA AGTGTATGCA ATGGACGTGC TGAGGGAGCT CGGCATCGAG CGGCTGTTCG AGCGCGTGAT CGCGATCGAG CACATGCGCG ACCGCCGCTT GTGGCGCGCA AAGCCAGATC ACGCGATGCT GCGCCGCGCG ATGCGCGATG CGCATGTGCG TCTCGCCGAC GCCGTGCTCG TGGAAGACAC GCGCAGCCAT CTGAAGAACT ATCGGCGGCT CGGCATCCGC ACGGTATGGA TCGTCGGTCA TCTGCCGCGG ACGGTGCGCG CGGACGGCAC GCGTGCGCGT CTTCCCGGCA CGGGACGCCC GCACTATGTC GACCGTCGCA TTCGTTCGCT AAAATCGCTA AGACTGGGCA ACCGCCCGGA AGGCCGATCG GTCCCCTGA
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Protein sequence | MMRPSRPKRR RPQIHAGTPV WLFDLDNTLH HASHAIFPAI NAAMTQYIVD TLQVERDEAN RLRTGYTQRY GAALLGLTRH HPVDPHDFLK YVHTFPDLRA MLRSERGLKR LVDALPGRKI VLTNAPEVYA MDVLRELGIE RLFERVIAIE HMRDRRLWRA KPDHAMLRRA MRDAHVRLAD AVLVEDTRSH LKNYRRLGIR TVWIVGHLPR TVRADGTRAR LPGTGRPHYV DRRIRSLKSL RLGNRPEGRS VP
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