Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_3477 |
Symbol | |
ID | 6201100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3952822 |
End bp | 3953256 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641707431 |
Product | thioesterase superfamily protein |
Protein accession | YP_001834523 |
Protein GI | 182680377 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.288335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.350284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGATG AGGTCCGACT CGACGATTTT CCGTTGCATG CATCGGACAA GATCCGCTTT GGAGATACAG ACAGCCTCGG TCACATCAAC AATGCTGTAT TCGCCACATT TCTCGAAACC GGCCGAGCCG AAATCCTTTG CGATCCTCGA GCACCGCTCG CGGCGCCTGG CACTGTTTTC GTCCTCGCCC GTCTCGTCCT CGACTTTCGG GCCGAGATCA CATGGCCGGG CGAGATCCTG ATCGGCACGC GGATCGCCGG GGTCGGCCGG AGTTCGATCC GGCTTGAACA GGCTTTGTTT CAGAACGAAC GATGCGTCGC CACCAGCGAG ACCGTCATTG TGCTGATGGA TGAAATGACC CGTCGCTCCA CGCCCTTGGC CTCGACAACG GTCGAATGGC TGGCGTCCCT TCTGCCCCAA TCGACGGCCT CATAA
|
Protein sequence | MKDEVRLDDF PLHASDKIRF GDTDSLGHIN NAVFATFLET GRAEILCDPR APLAAPGTVF VLARLVLDFR AEITWPGEIL IGTRIAGVGR SSIRLEQALF QNERCVATSE TVIVLMDEMT RRSTPLASTT VEWLASLLPQ STAS
|
| |