Gene Bind_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3202 
Symbol 
ID6201216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3644206 
End bp3645774 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content56% 
IMG OID641707150 
Productgluconate 2-dehydrogenase (acceptor) 
Protein accessionYP_001834251 
Protein GI182680105 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0960335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAT TCGATCTCAA TGATGATTCT GTTGTCGTGA TCATCGGTTC CGGCGCGGGT 
GGGGGAACGC TCGGCACGGA GCTCGCCTTG AAAGGTATCA AGGTTGTGAT GCTCGAGGCT
GGACCCCGTT TCGAAATCGA GGATTTCATC AACGACGAAT GGGAGAGCTT CACGCAATTG
TCCTGGAGCG ATATGCGTAC GACGTCAGGC TCCTGGCGCG TTCATAAGGA CTTCCCGAAT
CTGCCGGCCT GGATCGTCAA AGCGGTTGGT GGCACCTCCA TCCATTGGGC GGGGGCCTCG
CTGCGGTTCC AGGACCATGA ATTCAAGACC CGCACGCATT ACGGAGAGGT CCAGGGCGCA
AACCTCCTCG ATTGGCCGAT TACACTCAAG GATCTCGAGC CCTATTATGA CAAGGCCGAG
TCCAAAATGG GTGTCACACG GACCAATGGG ATCCCCGGCC TACCAGGCAA TAATAATTAC
AAGATCCTGG AAGCCGGTGC GAAGGCCCTC GGCTATAAGG AGGTTCATAC GGGACGCATG
GCGATCAATT CGCAGCCGCG TGACGGCCGT GGCAGTTGCC AGCAGATCGG TTTCTGTTTC
CAAGGCTGTA AATCCGGCGC GAAATGGTCG ACGCTTTACG CCGAAATCCC GAAAGGCGAG
GAAACCGGCA AGCTTGAGGT TCGGCCGGAA AGCCACGTTC TGCGCATCGA ACACGATGCC
AATGGCAAAG TCACCGGTGT CGTTTACGCC GATAGTCAGG GCAATCGGCA AAGACAGAAG
GCGCGTATCG TCTGCATTGC CGGCAATTCG ATCGAAAGTC CGCGTATTCT GCTCAATTCG
GCCTCAAATC TGTTCCCGGA TGGTCTCGCC AATTCCTCGG GTCAGGTCGG ACGCAATTAC
ATGCGGCATA CGACCGGTGC TGTCTTCGGA ATTTTCGATC GGCCGATCCA TATGTATCGT
GGCACGACCA TGGCCGGTAT CGTCCGCGAT GAAAGTGGTC ACAAACCGGA ACGCGGTTTC
GTCGGTGGCT ATGAACTGGA GACGATTTCG GTCGGCCTGC CCTTCATGGC GGCCTTCCTC
AACCCTGGTT CCTGGGGCAG GAGTATCACG TCGGCGCTCG ATTCCTATCA GAATATGGCA
GGTCTCTGGA TCGTCGGTGA GGATATGCCG CAGGAGACGA ATCGCGTCAC TTTGGACAAT
GCGGCCAAGG ACAAATATGG TCTGCCGGTC GCTAATGTTC ATTATGATGA TCACGCCAAT
GACATTGCCA TGCGCAATCA TGCCTATGAG CGCTCGACTG CGCTTTATGA GGCCGTAGGC
GCCAGGCGCG TCTTCCCGCA GACACCTTAT CCATCGACGC ATAATCTCGG CACCAATCGC
ATGTCCGAAA AGCCTCGTGA TGGCGTCGTG AACAAATATG GCCAGACCCA TGACATCAAG
AATCTCTTTG TGTCGGATGG GTCACAATTC ACGACGGGGG CCGGCGAAAA TCCGACGCTG
ACCATTGTCG CGCTTGCTAT CCGGCAAGCT GACTACATTG CTGCGGAAAT GGGCAAGCGT
ACAATCTGA
 
Protein sequence
MTKFDLNDDS VVVIIGSGAG GGTLGTELAL KGIKVVMLEA GPRFEIEDFI NDEWESFTQL 
SWSDMRTTSG SWRVHKDFPN LPAWIVKAVG GTSIHWAGAS LRFQDHEFKT RTHYGEVQGA
NLLDWPITLK DLEPYYDKAE SKMGVTRTNG IPGLPGNNNY KILEAGAKAL GYKEVHTGRM
AINSQPRDGR GSCQQIGFCF QGCKSGAKWS TLYAEIPKGE ETGKLEVRPE SHVLRIEHDA
NGKVTGVVYA DSQGNRQRQK ARIVCIAGNS IESPRILLNS ASNLFPDGLA NSSGQVGRNY
MRHTTGAVFG IFDRPIHMYR GTTMAGIVRD ESGHKPERGF VGGYELETIS VGLPFMAAFL
NPGSWGRSIT SALDSYQNMA GLWIVGEDMP QETNRVTLDN AAKDKYGLPV ANVHYDDHAN
DIAMRNHAYE RSTALYEAVG ARRVFPQTPY PSTHNLGTNR MSEKPRDGVV NKYGQTHDIK
NLFVSDGSQF TTGAGENPTL TIVALAIRQA DYIAAEMGKR TI