| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3153 |
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| Symbol | |
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| ID | 6201452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 3597425 |
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| End bp | 3598321 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641707101 |
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| Product | squalene synthase HpnC |
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| Protein accession | YP_001834203 |
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| Protein GI | 182680057 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGC CCGCCACCCT CGAGGTCGCT GCCTCCAAGG ATCATCACGG CGAGAATTTT
CCTGTCGCCT CCGTCCTCAT CGCCCCGCGC TATCGCCCGG CGATTCTCGC TTATTATCGT
TTTGCCCGCG CCGCGGATGA TATAGCCGAC AGCCCGACGC TAACGCCGAA AGAAAAGATC
GCGCGGCTCG ACGCCTTCGA AGCCACCTTG CTCGGTCACA CCGACAGCGC CGCCACCGCT
TTGCCGCTAC GCGCAAGTCT CGCCGAGACG GGAATCACCC CGCGCCATGC GCTCGATCTC
CTGACCGCCT TCCGCATGGA TGCGGTCAAG ACCCGCTATG CCGATTGGGC TGAACTCATG
CATTATTGCG CCTATTCGGC TGCACCGGTG GGACGTTACG TGCTTGCTGT GCATGGCGAG
AGCGAGGCGA CTTGGCCGGC CTCGGATGCG CTTTGCGCCG CCTTGCAGGT GATTAATCAT
CTCCAAGATT GCGCCAAGGA TTACCGCGAG ATCAACCGCG TCTATATTCC CCTCGACACG
TTGACGGCGC AGGGCATCGG TGTCGAGGCC CTGGCCGCAC CAGAGGCGTC GACAGCCTTG
CGCGCGTGCC TCGATGGCCT CATCGACAAG ACGGCCGATC TCGTCGCCAC GGGATGGCTG
CTGCCACCAC AAGTACGCGA TATCCGCCTG CGGATCGAAA CCGCGATGAT CGCGCAGCTG
GCTGACAAGC TCGTCACCCT TCTCCAGAAG GCTGATCCCT TGAGCGAAAA GGTGCATCTG
GCGAAATTCG ACTTTCTGCT GCAAGCGATC CTTGGCCTGT TCAAAGGGCT CTTCACAGGC
TTCGCCTCGA GCCCGCGCGT CGGTGCGCTC AACTCCGTTC CGGCGAAGGA GAAGTGA
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| Protein sequence | MTQPATLEVA ASKDHHGENF PVASVLIAPR YRPAILAYYR FARAADDIAD SPTLTPKEKI
ARLDAFEATL LGHTDSAATA LPLRASLAET GITPRHALDL LTAFRMDAVK TRYADWAELM
HYCAYSAAPV GRYVLAVHGE SEATWPASDA LCAALQVINH LQDCAKDYRE INRVYIPLDT
LTAQGIGVEA LAAPEASTAL RACLDGLIDK TADLVATGWL LPPQVRDIRL RIETAMIAQL
ADKLVTLLQK ADPLSEKVHL AKFDFLLQAI LGLFKGLFTG FASSPRVGAL NSVPAKEK
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