Gene Bind_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_3080 
Symbol 
ID6199604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3517749 
End bp3518681 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content64% 
IMG OID641707027 
Productdihydrodipicolinate synthetase 
Protein accessionYP_001834130 
Protein GI182679984 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.151038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCT CTCCCTTGAA GCGCCCCCAT CGCGGTGTCT TTCCCGTCGC TCCGACAGTG 
TTCGACGCCA ATGGAGCTCT CGATCTCGAT GGCCAGAAGC GCGCCATCGA TTTCATGATC
GATGCCGGCT CCAATGGACT CTGCATTCTC GCCAATTTCT CCGAGCAATT CGTGCTGACC
GACGCCGAGC GCGAGGCGGT GACTGTCACC GTGCTGGAGC ATGTGGCCGG CCGCGTGCCG
GTCATCGTCA CTACGACGCA TTTCGCTACC GCGGTCTGCG CCGAGCGCTC GCGCCGGGCG
CAGAATGCCG GTGCAGCCAT GGTCATGATC ATGCCGCCCT ATCACGGCGC TACCTTCCGC
GTGCCCGAGG CCGCCATCTT CGATTTCTAT CGCGCCGTCT CCGATGCCGT GTCGATTCCG
ATCATGGTGC AGGACGCGCC GGTGGCCGGG ACACCGCTCC CGGTGCCGTT CCTCGCGCAC
ATGGCACGAG AGATCGAGAA TCTCGCCTAT TTCAAGATCG AGGTCCCGCA GGCAGCGGCC
AAGCTCAGGG CGCTGATCGC GGAAGGCGGC GACGCCATAG AAGGGCCATG GGATGGCGAA
GAGGCGATCA CGCTGATGGC AGACCTCGAC GCCGGTGCGA CCGGAGCGAT GACTGGCGGC
GGTTATCCCG ATGGCATCCG CCAAATCACT GACGCTTATT TCGCCGGCGA CCGGGAAGCG
GCGATGGATG CTTATCAGCG CTGGCTGCCC CTCATTAATT ACGAGAACCG CCAGTGCGGT
CTTTCGGCCT GCAAGGCGCT CATGAAAGAA GGCGGTGTCA TCGCCCACGA CACCGTGCGG
GCACCCCTGC AGCCGCCGCA TCCCGCCATC CGTGCCGGCC TCATCGAGAT CGCGCAAAGG
CTCAACCCAC TCGTCTTGCA ATGGGGCAGG TGA
 
Protein sequence
MSTSPLKRPH RGVFPVAPTV FDANGALDLD GQKRAIDFMI DAGSNGLCIL ANFSEQFVLT 
DAEREAVTVT VLEHVAGRVP VIVTTTHFAT AVCAERSRRA QNAGAAMVMI MPPYHGATFR
VPEAAIFDFY RAVSDAVSIP IMVQDAPVAG TPLPVPFLAH MAREIENLAY FKIEVPQAAA
KLRALIAEGG DAIEGPWDGE EAITLMADLD AGATGAMTGG GYPDGIRQIT DAYFAGDREA
AMDAYQRWLP LINYENRQCG LSACKALMKE GGVIAHDTVR APLQPPHPAI RAGLIEIAQR
LNPLVLQWGR