Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2628 |
Symbol | |
ID | 6198689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 2993937 |
End bp | 2994551 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641706589 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001833703 |
Protein GI | 182679557 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCTTC GTCATCTTGT GGCGGCAACG GGACTGTCGC TGCTGAGCCT ATGTCCTGTC CTCAGGCAGG AAAAGTCGGC TGAGCTGCGC ATCGGCATCA CCACCTACAA TTCCGGTCCC TCATCGGTCG TCGGCATCCC AGCCCGTGAC GCAGCAGAGA TGCTTGGCTC CAAGAGCAAC GTTAAAGGAG GCCTGCAGGG CGTACCGGTC GAGCTCTACT TTGACGAAGG CGCAGGTGCC AAAGCACTGA CGATTCGATA TGGCGACCTT ATCGAGAATT CCGGGAGGGG CGTGATGTTC GCTCTCATCT CCTCAGGTGT GTGCAATGAG GCGCTGCCCG CGGAAGATCT CAAGGTCCTC AACTTAATGT GGGACTGCGG CACCCAGTGC ATCCTCATGG ATGACAAATA TTCCTACGTC TTCGGCACCC AGGCGAATGC AGCTCTCGAG GTCATGGCGC CATCGCTCAA CCTTTTCAAG ACCAAGCTGG TCTCCGAGAC GATCGCCGTG GTGAGCCAGG ACAACGTCTG GGGTCAGGGC AACCGGTCCA TCTTCTCCCA GGACATTGTG GGCCGGGCCG CCCAACGTGG CCAGTTCAAA TCCTGCCCGA GCTGA
|
Protein sequence | MMLRHLVAAT GLSLLSLCPV LRQEKSAELR IGITTYNSGP SSVVGIPARD AAEMLGSKSN VKGGLQGVPV ELYFDEGAGA KALTIRYGDL IENSGRGVMF ALISSGVCNE ALPAEDLKVL NLMWDCGTQC ILMDDKYSYV FGTQANAALE VMAPSLNLFK TKLVSETIAV VSQDNVWGQG NRSIFSQDIV GRAAQRGQFK SCPS
|
| |