| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2600 |
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| Symbol | |
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| ID | 6200512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 2965034 |
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| End bp | 2965705 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641706568 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001833682 |
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| Protein GI | 182679536 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.167475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGTAA AGATGTTTAC GACTTTCTCT GCACGCCTTT CCATCTTGGT CGCCTGTCTG
TTCGTATTGC CGGTCAATGC TGTAGACAAT TCTTCTTTAG ATACCGAGAT CAAGCATCTA
CGGACGCAGT GGGAGAGCAT CAAGTTTAGT GTTTCCGACG TATCGAAGAG GGTACAGCTC
ATGAATGCCC TTGGTGAAGA AGCTGACTCT GTTGCAACAA AATATCCTGA TAGGGTCGAG
GCTTTGATAT GGGACGGTAT TGTCACGAGC GAGCGAGCTT CCATGGCGAG CGCATTCTCG
GCTCTTGGTC TGGCCAAGAG GTCCCGAGAT ATTCTTGAGA AGGCCTACGC GATGGATCCC
GCCGCGCTTG ACGCGGCTGC CCCAACGATT CTTGGCGTCC TTTACTATCG AGTTCCTGGC
TTTCCAGTTG CGTTTGGCGA TACTGGCAAA GCACGACGAT TATTCGAAGA GGCTGTACAG
CTGGCACCAA ACGGGTTGGA TGCCTGGTTT TTCTACGGAG AATTTCTTTA TTCGGATAAG
GACTATACGA GAGCTGCCGA GGTCCTTCAT CATGCACTTT CATTGCCGCA CCAACGTAAC
CGTCCGATAT GGGACGAACA CTGCCGTCTT GTCATACGGG AGTTACTCGC GAAGATTCAA
GACAAGTCGT GA
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| Protein sequence | MPVKMFTTFS ARLSILVACL FVLPVNAVDN SSLDTEIKHL RTQWESIKFS VSDVSKRVQL
MNALGEEADS VATKYPDRVE ALIWDGIVTS ERASMASAFS ALGLAKRSRD ILEKAYAMDP
AALDAAAPTI LGVLYYRVPG FPVAFGDTGK ARRLFEEAVQ LAPNGLDAWF FYGEFLYSDK
DYTRAAEVLH HALSLPHQRN RPIWDEHCRL VIRELLAKIQ DKS
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