| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2596 |
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| Symbol | |
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| ID | 6200416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 2962321 |
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| End bp | 2962950 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641706564 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001833678 |
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| Protein GI | 182679532 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.230663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCACAC TCACCGCAAT CTTTTCTCCG GCCGCGATGG CTGTGGAGGA CCCTGCCCTC
ACCACTGTTA GCCAGCTCCA GACCAAGTGG GAAACTTACA AGTTCGAAGT TCCAGAGGGC
GATAAGCAGA CCGCCTTTAT GAATTCGCTG GGAGAAGAGG CTGACGCCGC AGAGACCCGG
TTCCCTGGCC GGGTTGAGGT TTTAATCTGG GACGGGATCA TCACTAGTGA GCGTGCCTCG
ATGGCGAATC CGCTGAGTGC TTTAGGCCTC GCAAAACGGG CCCGTGATAT TTTGGAGAAA
GCCTACAAAA AGGATCCGGC TGCATTGTCG GCCGGAGCCA CGACAAGCCT CGGCGTTCTT
TACTATCGGG TCCCGGGATT TCCTATCGGA TTCGGTGACA CGGAGAAGGC CCGCCAATTG
CTCGAACAAG CCGTTCAGCT CGCACCTACC GGGCTCGATG CTTTGTACTT CTACGGTGAT
TTTCTTTATA ATCAGAAGGA ATATGCGAAG GCATTGGATG TTTTTGTTCG CGCGCAAAAG
CTCCCTCCAC ATCCCGACCG ACCGCTTTGG GATCATAACC GCCACCTCAT GATTGGCGAG
TTGATTGAAA AGATCCGGGC CAAGATGTGA
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| Protein sequence | MCTLTAIFSP AAMAVEDPAL TTVSQLQTKW ETYKFEVPEG DKQTAFMNSL GEEADAAETR
FPGRVEVLIW DGIITSERAS MANPLSALGL AKRARDILEK AYKKDPAALS AGATTSLGVL
YYRVPGFPIG FGDTEKARQL LEQAVQLAPT GLDALYFYGD FLYNQKEYAK ALDVFVRAQK
LPPHPDRPLW DHNRHLMIGE LIEKIRAKM
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