Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2400 |
Symbol | |
ID | 6199398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 2741103 |
End bp | 2741750 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641706384 |
Product | periplasmic protein-like protein |
Protein accession | YP_001833500 |
Protein GI | 182679354 |
COG category | [S] Function unknown |
COG ID | [COG3904] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.39497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACC GCGGGGGAGG GGGGCTGCTG GTCTTGGCTT TGGCTTATGG ATTGGCGGGC TTGCAACCGG CGCGTGCCGA TTCCATGGCC TTCCGCCTCA TCCCGGCGGG CCCAAAGAGC GCTTGCGGTG TGGATTGCCA GGCCGTCGCG ATGGAAGGTG AAATCACTGA TGCGACGCCG GAGGCTTTCC TGCGTTTCAT GCAGCGCAAT TTGCCCCAGC ATCCCATTCA ATCCGTCGTC TATATGCATT CCTATGGCGG GAAAGTCATG GCGGCCATGG AGCTCGGCAA GATTTTCAGA CGATTGGGGC TGGTGGCTGT CGTGGCGCGC GTCGAGCAGG GCGATGATCA AGCGGCGCAG CTCATTGGAG CGCGATGCTA TTCGGCGTGC GTCTATGCGC TGATGGGGGC CCGTAAACGG GTGATTCCGC CTCAGAGCGA GCTTGGTCTC CACAAGATGT ATCTCTTGTC CATTGAAGGG CGTCAGGAGG ACGATGGCGA GATGAGCCAG GTTCTGGAAC GCTATACGCG GTCGATGGGG GTCAGCCCCA ATGTGATCGT CTTGGCTGAA CATATGCGGC CCGAGGATGT GCATATTGTG AGTCGCGCCG AAATCAGCAA ATGGCATCTG GGCTCCGCGA CCCTGTAA
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Protein sequence | MMNRGGGGLL VLALAYGLAG LQPARADSMA FRLIPAGPKS ACGVDCQAVA MEGEITDATP EAFLRFMQRN LPQHPIQSVV YMHSYGGKVM AAMELGKIFR RLGLVAVVAR VEQGDDQAAQ LIGARCYSAC VYALMGARKR VIPPQSELGL HKMYLLSIEG RQEDDGEMSQ VLERYTRSMG VSPNVIVLAE HMRPEDVHIV SRAEISKWHL GSATL
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