Gene Bind_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1921 
Symbol 
ID6201191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2190284 
End bp2191576 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content63% 
IMG OID641705910 
ProductFmu (Sun) domain-containing protein 
Protein accessionYP_001833034 
Protein GI182678888 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCTG CCGCCCGTCT GAGCGCCGCG ATTGAAATTC TCGCTGACAT TGAAACCCGC 
CGCCGCCCTG CTGCCGATGC CGTAAAAGAT TGGGGCCTTG CCCATCGTTT CGCTGGATCG
AAGGATCGCG CCGCCATTGC GGGCCTCGTC TATGACGCCT TGCGGCGCAA GGCGTCATCG
GCCTGGATCA TGGGCGAGGA CACTCCCCGC GCGGTTTTGC TTGGGTCCTT GCGGCAGGTG
CAAGGCCTGC CTCTGGATGC CGTCGAAGCT TTGTTCAGTG GCGAGGGCCA TGCGCCGGCT
CTTTTGAGCG ATGCGGAAAA GCAGCGCTAT CGTGATGGCA CTCTCGATGA TGCGCCGGCC
TCTGTCGCGG GCGACTTCCC GCAATGGCTG GAACCCGCCT TTCAGCGCGT CTTCGGCGCC
CTGGCGGCGG CGGAAGGCGA GGCGCTTGCC GCCCGTGCGC CGCTTGATCT GCGCGTCAAT
CTGCTGAAAG GGGATCGCGC CAAGGCGATC AAAGCCTTGG CCCATCTCAA GCCAGAACCC
ACACCTTATT CGCCCTTCGG CCTGCGCCTG CCGCTTTTGC CTGATGGCCG CGCCGCGCCG
CTTGTGGCCG AGGCGGCTTA CGTCAAAGGT CTGGTCGAGG TGCAGGACGA AGGCTCGCAA
CTCGCCGCGC TTCTCGCCCA TGCCAAGCCG GGGGAACAGG TTCTGGACTT ATGCGCCGGT
GGCGGCGGCA AGACCCTGGC TCTGGCAGCC TTGATGAACA ATAAGGGCCA GATTTATGCG
AGCGACAATG ATGGCCGCAG GCTCGCGCCG ATCCATGAAA GGCTCAAACG CGCTGACGTG
CGCAATGTGC AGGTGCGCGC GCCGCGCGGC CGTGTGGCAA AGCTCGATGA TTTGGAAGGA
CGCTGCGATC TCGTTTTCGT CGATGCGCCG TGTACAGGCA CGGGCACATG GCGGCGCAAC
CCCGACGCCA AATGGCGGAT CAGACCGGGT GCGCTGGAAG AACGGATCAA GCAACAGAAT
GAAACCCTCG CCACGGCCGC CCGCTATGTA AAGCCGGGCG GGCGGATTGT GTATGCGACC
TGCTCGGTCC TGGCCGAAGA GAACGAAGAC CGGATTACGG ATTTCTTGAA GGAGAACGCC
GGTTTTCAAG CAAGGCCAGC GGGAGACATG GCGCGGGAGG CTGGTCTTCC GATGCTGGCC
GATTTCGCCT CGACGTTGGG ACCGGGTTTG CGGCTGACGC CGAGGACAAG CGGGACCGAT
GGTTTCTATG TGGTGGAATT GACGCGTGAA TAA
 
Protein sequence
MIPAARLSAA IEILADIETR RRPAADAVKD WGLAHRFAGS KDRAAIAGLV YDALRRKASS 
AWIMGEDTPR AVLLGSLRQV QGLPLDAVEA LFSGEGHAPA LLSDAEKQRY RDGTLDDAPA
SVAGDFPQWL EPAFQRVFGA LAAAEGEALA ARAPLDLRVN LLKGDRAKAI KALAHLKPEP
TPYSPFGLRL PLLPDGRAAP LVAEAAYVKG LVEVQDEGSQ LAALLAHAKP GEQVLDLCAG
GGGKTLALAA LMNNKGQIYA SDNDGRRLAP IHERLKRADV RNVQVRAPRG RVAKLDDLEG
RCDLVFVDAP CTGTGTWRRN PDAKWRIRPG ALEERIKQQN ETLATAARYV KPGGRIVYAT
CSVLAEENED RITDFLKENA GFQARPAGDM AREAGLPMLA DFASTLGPGL RLTPRTSGTD
GFYVVELTRE