Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1868 |
Symbol | |
ID | 6198852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 2128559 |
End bp | 2129680 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641705855 |
Product | chorismate synthase |
Protein accession | YP_001832981 |
Protein GI | 182678835 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.423516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCACA ATACATTCGG CCATCTCTTT CGCGTGACGA CCTTTGGGGA AAGCCATGGA CCGGCCATTG GCTGCGTGGT GGATGGTTGC CCTCCCTTGA TCCCAATCGA TGAAGCCGAC ATCCAGACCT TTCTCGATCT GCGCCGTCCC GGCACGTCGC GTTTCACGAC ACAGCGCCAG GAAGCCGATC GTGTGCGTAT CCTCTCGGGT GTCTTCACGG ACGAGGCGAG CGGCAAACAG GTTTCGACGG GCACACCGAT CGCGCTCCTG ATCGAAAATA CGGATCAGCG CTCGAAGGAT TATGACGCGA TCAAAAATCT CTATCGACCA GGCCATGCCG ATTTCGCCTA TGACGCAAAA TATGGCTTGC GTGATCATCG TGGCGGGGGC CGTTCCTCGG CGCGCGAAAC CGCGACGCGG GTCGCAGCCG GTGCCATCGC CCGCAAGGTG GTCGCGGATG TGACGATCAG AGGGGCCCTC GTGCAGATGG GGCCGCATAA GATCAACCGC GACGCGTGGG ATTGGGACGA GACGACGCGC AATCCCTTCT TCTGCCCGGA TGCAAAGGCG GCGGCTTTTT TTGAAACTTA TCTCGATGAT ATACGCAAGG CCGGGTCCTC GATTGGCGCG GTCATTGAGA TCGTCGCGGA GAATGTGCCG GCCGGCTGGG GCGCTCCGCT TTATGGCAAG CTCGACGCTG ATCTTGCTTC CGGCTTGATG TCGATCAATG CGGTGAAAGG TGTCGAAATC GGCGAGGGTT TTGACGCGGC CGCGCTGAGC GGTGAAGCCA ATGCCGATGA AATGCGGATC GGTTCTCTCG GCGAGCCGGT CTTTCTCTCG AACCATGCGG GCGGCATTCT GGGGGGTATT TCGACGGGCC AGCCGCTCGT CATGCGCTTT GCTGTCAAAC CGACCTCTTC GATCCTGCAA CCGCGTCATA CGATCGACCG TTCAGGCCAT GAAAGCGAGA TCGTCACTAA GGGGCGTCAT GATCCGTGTG TCGGCATACG CGCCGTGCCG GTGGGCGAGG CCATGGTCGC TTGCGTGCTC GCCGATCATT TTCTGCGCCA TCGCGGCCAG ATCGGTGAAG GCGCTGTCTG GCCGGCGAAC CGATCACGCT GA
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Protein sequence | MSHNTFGHLF RVTTFGESHG PAIGCVVDGC PPLIPIDEAD IQTFLDLRRP GTSRFTTQRQ EADRVRILSG VFTDEASGKQ VSTGTPIALL IENTDQRSKD YDAIKNLYRP GHADFAYDAK YGLRDHRGGG RSSARETATR VAAGAIARKV VADVTIRGAL VQMGPHKINR DAWDWDETTR NPFFCPDAKA AAFFETYLDD IRKAGSSIGA VIEIVAENVP AGWGAPLYGK LDADLASGLM SINAVKGVEI GEGFDAAALS GEANADEMRI GSLGEPVFLS NHAGGILGGI STGQPLVMRF AVKPTSSILQ PRHTIDRSGH ESEIVTKGRH DPCVGIRAVP VGEAMVACVL ADHFLRHRGQ IGEGAVWPAN RSR
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