| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1733 |
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| Symbol | |
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| ID | 6199643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 1960109 |
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| End bp | 1961677 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641705724 |
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| Product | protease Do |
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| Protein accession | YP_001832852 |
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| Protein GI | 182678706 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.613226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00274873 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTTTGG CCCGCAGGTT CCTTCCCGTT TCCTTCCCCC TACCGGTACG ACCCGCGCGA
GGCCGGGCGC TGCGCTTCGG CTCAAGCCTC GCACTGAGCC TCACTTCGGG ACTCATGCTG
GCCACGACCT CTTTGCCGCC TTTTACCTTG GTCGAGGCAC AAGCGCGCGG ACCAGAATCC
CTGGCCGATC TCTCGGCTGC CGTCAGCGAT GCGGTCGTCA ATATTTCCGC GACGCAGACC
GTGGACGAAA AGCGCCCCGG CAATGGGCCA CAGCTTGAGC CAGGCACGCC GTTCGACGAT
CTGTTCGAGG AATTTTTCCG TCGCCGGCAG CAGCGTGGCG GTGGTGGGGG TGGCGGTGCC
GTTCCGCGCC CGCATGAGCG CCGCTCGAAT TCGCTGGGCT CTGGCTTCGT CATCGATCCG
GCCGGCATCA TCATCACCAA TAATCACGTC ATCGCCGATG CCAATGAGGT GACGGTCATC
TTTACCGATG GTCAAAAGCT CAAGGCGCAG GTCCTCGGCA AGGATGCGAA GGTCGATGTG
GCTGTCCTCA AGGTCAAGCC GGAGAAGCCC CTGAAGGCCG TTAAATTCGG CGACAGTGAA
GTCATGCGGG TCGGTGATTG GGTCATTGCC GTCGGCAATC CCTTCGGGCT CGGCGGCACG
GTGACGGCGG GCATTGTTTC GGCGCGCAAC CGCAACATCG ATTCCGGCCC TTACGACAAT
TATATCCAGA CCGATGCAGC CATCAACAAG GGGAATTCCG GTGGCCCCTT GTTCAATATG
GCCGGTGAGG TGATCGGTAT TAATACAGCG ATCCTGTCGC CCTCCGGCGG CTCGATCGGC
ATCGGTTTCG CGACGCCTGC GTCCATGGTC GTTCCGATTG TGGAGCAATT GCAGAAATTT
GGCGAAACAC GCCGGGGCTG GCTTGGCGTG CGCATCCAGA ATGTCGATGA CACCATCGCC
GAAAGCCTCA ATCTCGGCAC GGCGCGCGGC GCGTTGATCG CCGGCGTGGA CGACAAGGGA
CCGGCCAAGT CGGCTGGCCT CTCCGCTGGC GACGTCATCG TCAAATTCGA TGGCACTGCA
ATCAAGGAAT CGCGTGATCT GCCCAAGCTC GTCGCCATGG CCGCCGTCGG CAAGGACGTG
CCGGTCGTCC TGATCCGTCA GGGCAAGGAG ATCACCAAAA ACGTGAAGCT CGGCCGTCTC
GAGGACAATG AGAAACAGGC CTCGCTCAAT ACGCCCGATC GCGACGAAAG CGCGCTCGGC
TCAGCGAGCC AGCGTGTCCT GGGGATGAGC CTGTCTGCGC TGACCGACGA AGCTCGGCAG
AAATTCGCGA TCCGCGACAC TGTCGCATCG GGCGTCGTCA TCACCGATGT CGATCCTGAA
TCGGCGGCGG CGGAAAAACA TATTCAGCCG GGTGAACTGG TCGTCGAAAT CAATCAGGAC
GCGGTGAAGA CACCGGCCGA GATCAACAAG AAATTGCAGA GCCTGAAGGA GCAAGGCAAG
AAATCAGCTT TGCTGCTCGT CTCCAACGGA CAGGGTGAAG TGCGTTTCGT CGCTCTTGCC
ATTCCTTGA
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| Protein sequence | MGLARRFLPV SFPLPVRPAR GRALRFGSSL ALSLTSGLML ATTSLPPFTL VEAQARGPES
LADLSAAVSD AVVNISATQT VDEKRPGNGP QLEPGTPFDD LFEEFFRRRQ QRGGGGGGGA
VPRPHERRSN SLGSGFVIDP AGIIITNNHV IADANEVTVI FTDGQKLKAQ VLGKDAKVDV
AVLKVKPEKP LKAVKFGDSE VMRVGDWVIA VGNPFGLGGT VTAGIVSARN RNIDSGPYDN
YIQTDAAINK GNSGGPLFNM AGEVIGINTA ILSPSGGSIG IGFATPASMV VPIVEQLQKF
GETRRGWLGV RIQNVDDTIA ESLNLGTARG ALIAGVDDKG PAKSAGLSAG DVIVKFDGTA
IKESRDLPKL VAMAAVGKDV PVVLIRQGKE ITKNVKLGRL EDNEKQASLN TPDRDESALG
SASQRVLGMS LSALTDEARQ KFAIRDTVAS GVVITDVDPE SAAAEKHIQP GELVVEINQD
AVKTPAEINK KLQSLKEQGK KSALLLVSNG QGEVRFVALA IP
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