Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1408 |
Symbol | |
ID | 6201118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 1619533 |
End bp | 1620465 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641705404 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001832537 |
Protein GI | 182678391 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.349325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAT TGGACGTCAC ACTTGAGCGC ATACGCACCT TCGTCCGCGT CGCCGAGCGC GGGAGCCTGT CGGCGGTCGC GCGGGAGCAG GAGGTCGGTC AGTCGACCGT CACCCGGCAT TTGCGAGAAC TCGAGGAAGC TGTCGGCGTG CCCTTGCTCA GCAGGACGAC CCGGCGTGTC ACGCTGACCG ATGAAGGCAG CCGCTATTAT GCCAATAGCG TCCAGATCCT GCGCCTCGTG GAGCAGGCCG GCGATGAGGC ACGAGGCACG CGCGGTGCGC CAGCCGGCAC GATCCGGATA TCCTGCACCG CGGCTTTCGG GGTTTTGCAC GTCAGCCGGA TGATCTTTGC CTTCCAGGAT CGCTATCCCA ATATCGGGGT CGACCTCAGC CTGACCGACG AACGTGTCGA CCTTGTCCGT GAGGGCGTCG ATATTGCGCT TCGCCTGGGT CCGCTCACCG ACAGTTCCAT GAAGCTACGA TCCCTCGGAC AGAGCCGGCG CCTGCTGGTG GCAGCACCGT CCTATCTGGC TGCACGGGGA ACGCCGGCTG TCCCGCAGGA CCTGTCTGCT CATGAAGGCA TTCGGATGTC GCATGTGGCG GGAAGCGACA CCCTCATCTT GCAGGGGCCG GGCGGTGAGC GCCATGCTGT GCCTTTTGGA GGGCGTTTTC GGATTGACCA TGGGCTTGCC GCCCGCGAGG CCTTTGTCGC AGGGCGCGGC ATTGGACCCG CCCATCGATG GCTTGTCGAT GATCTCCTGC AAACGAGCCG GCTCCAGGAG ATCCTGCCCG ATTATTCGCT ACCACCCGCC CCGCTGAGCA TGCTGATTGT TCCGGAGCGC GCGGGCATTG CCCGGGTCCG GCTGGTGGCT GATTTCCTTG CGGAGCAGAT TAGCGGCGTT CCGGGGATTG AGAAGCCTCG GCCAGAGCGT TAG
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Protein sequence | MDKLDVTLER IRTFVRVAER GSLSAVAREQ EVGQSTVTRH LRELEEAVGV PLLSRTTRRV TLTDEGSRYY ANSVQILRLV EQAGDEARGT RGAPAGTIRI SCTAAFGVLH VSRMIFAFQD RYPNIGVDLS LTDERVDLVR EGVDIALRLG PLTDSSMKLR SLGQSRRLLV AAPSYLAARG TPAVPQDLSA HEGIRMSHVA GSDTLILQGP GGERHAVPFG GRFRIDHGLA AREAFVAGRG IGPAHRWLVD DLLQTSRLQE ILPDYSLPPA PLSMLIVPER AGIARVRLVA DFLAEQISGV PGIEKPRPER
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