Gene Bind_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1408 
Symbol 
ID6201118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1619533 
End bp1620465 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content64% 
IMG OID641705404 
ProductLysR family transcriptional regulator 
Protein accessionYP_001832537 
Protein GI182678391 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.349325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAT TGGACGTCAC ACTTGAGCGC ATACGCACCT TCGTCCGCGT CGCCGAGCGC 
GGGAGCCTGT CGGCGGTCGC GCGGGAGCAG GAGGTCGGTC AGTCGACCGT CACCCGGCAT
TTGCGAGAAC TCGAGGAAGC TGTCGGCGTG CCCTTGCTCA GCAGGACGAC CCGGCGTGTC
ACGCTGACCG ATGAAGGCAG CCGCTATTAT GCCAATAGCG TCCAGATCCT GCGCCTCGTG
GAGCAGGCCG GCGATGAGGC ACGAGGCACG CGCGGTGCGC CAGCCGGCAC GATCCGGATA
TCCTGCACCG CGGCTTTCGG GGTTTTGCAC GTCAGCCGGA TGATCTTTGC CTTCCAGGAT
CGCTATCCCA ATATCGGGGT CGACCTCAGC CTGACCGACG AACGTGTCGA CCTTGTCCGT
GAGGGCGTCG ATATTGCGCT TCGCCTGGGT CCGCTCACCG ACAGTTCCAT GAAGCTACGA
TCCCTCGGAC AGAGCCGGCG CCTGCTGGTG GCAGCACCGT CCTATCTGGC TGCACGGGGA
ACGCCGGCTG TCCCGCAGGA CCTGTCTGCT CATGAAGGCA TTCGGATGTC GCATGTGGCG
GGAAGCGACA CCCTCATCTT GCAGGGGCCG GGCGGTGAGC GCCATGCTGT GCCTTTTGGA
GGGCGTTTTC GGATTGACCA TGGGCTTGCC GCCCGCGAGG CCTTTGTCGC AGGGCGCGGC
ATTGGACCCG CCCATCGATG GCTTGTCGAT GATCTCCTGC AAACGAGCCG GCTCCAGGAG
ATCCTGCCCG ATTATTCGCT ACCACCCGCC CCGCTGAGCA TGCTGATTGT TCCGGAGCGC
GCGGGCATTG CCCGGGTCCG GCTGGTGGCT GATTTCCTTG CGGAGCAGAT TAGCGGCGTT
CCGGGGATTG AGAAGCCTCG GCCAGAGCGT TAG
 
Protein sequence
MDKLDVTLER IRTFVRVAER GSLSAVAREQ EVGQSTVTRH LRELEEAVGV PLLSRTTRRV 
TLTDEGSRYY ANSVQILRLV EQAGDEARGT RGAPAGTIRI SCTAAFGVLH VSRMIFAFQD
RYPNIGVDLS LTDERVDLVR EGVDIALRLG PLTDSSMKLR SLGQSRRLLV AAPSYLAARG
TPAVPQDLSA HEGIRMSHVA GSDTLILQGP GGERHAVPFG GRFRIDHGLA AREAFVAGRG
IGPAHRWLVD DLLQTSRLQE ILPDYSLPPA PLSMLIVPER AGIARVRLVA DFLAEQISGV
PGIEKPRPER