Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1387 |
Symbol | |
ID | 6199998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 1591052 |
End bp | 1592353 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641705383 |
Product | homoserine dehydrogenase |
Protein accession | YP_001832516 |
Protein GI | 182678370 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.617554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCGAC CTCTGCGTGT CGGCATCGCT GGTCTCGGGA CTGTCGGCGC CGCCGTGATC AAGCTCCTCG ACCGTCAAGC CGAGGCCCTG GCAAGCCGTG TTGGCCGCGC TGTGATCGTC ACAGGCGTCA GCGCCCGCGA TAAAACCAAG GAGCGCGGGA TCGACCTTTC CCGCTTTGTC TGGTTCGATG ATCCAGTCGC GCTCGCCCGT TCGGAAGAGA TCGATCTCTT CGTTGAACTC ATCGGCGGCG CTGATGGCAC CGCGCTCGCG GGCGCCGAAC AGGCCTTGGC TTCGGGTAAA CCGGTCGTCA CAGCCAATAA GGCGCTTCTC GCCCGTCATG GCATGCGACT CGCGACTTTG GCCGAGGAAA TGAGCCTGGC GCTCGCCTTC GAGGCTTCCG TCGCGGGCGG CATACCCATC GTCAAAACCC TGCGCGAGGG TCTCGCCGGG AATTCGATCG AGCGCGTCTA TGGGATTTTG AACGGCACCT GCAATTACAT TCTGAGCCGC ATGGAAACGG AAGGCCTGTC CTTCGAAGCC TGTCTCGCTG AGGCGCAAAA GCTCGGCTAT GCGGAGGCCG ATCCGACTTT CGACATCGGT GGTTTCGACA CGGCGCATAA GCTCGCCATT CTTGCGTCGC TCGCTTTTGG CACGGCCGTG GACCCGGAGG GGATCAGTGT CGAGGGCATC GAATCGATCA GCCTCGCCGA TCTCCAGGCC GCTGACGAAT TGGGCTATCG AGTCAAATTG CTGGGTGTCG CCCAGCGTTC TGCCGATGGT ATCGAGCAGC GCGTGCATCC GAGCATGGTG CCCAAAACCT CGGCCATCGC ACAGGTCATG GGCGTGACCA ACGCCGTGAC GATCGATGCC GATGCCGTGC ATGAATTGAC TCTCGCCGGG CCGGGCGCGG GTGGCGAGGC CACGGCTTCG GCCATTGTCG CCGATATTGC TGATATCGCC CGGGGTGTCC GATCCGCTCC CTTTGGTCTG CCGGTCGCGG CCTTGACCAG CTTGCCGCGG CCGCCCATGC GGCTGCATCA GGGCGGTTAT TATATCCGCC TTTCGGTGGA GGATCGTCCT GGCGCGGCCG CCGCCATTGC CAAGCGCATG GCGGAGCGGG AGATTTCGCT GGAAAGCATT GTTCAGCGGC GCCGTCCCGG CACTATCGCG AGCGGAGCAG TGCCGGTGAT CCTTGTGACC TACGCGACGC ATGAACAGAC TGTGCGTGAG GCGCTCGATG CCGTCGTCGC GGATGGCTAT CTCGCCGCAA AGCCGCAACT CATTCGGATC GAACGGGAAT GA
|
Protein sequence | MQRPLRVGIA GLGTVGAAVI KLLDRQAEAL ASRVGRAVIV TGVSARDKTK ERGIDLSRFV WFDDPVALAR SEEIDLFVEL IGGADGTALA GAEQALASGK PVVTANKALL ARHGMRLATL AEEMSLALAF EASVAGGIPI VKTLREGLAG NSIERVYGIL NGTCNYILSR METEGLSFEA CLAEAQKLGY AEADPTFDIG GFDTAHKLAI LASLAFGTAV DPEGISVEGI ESISLADLQA ADELGYRVKL LGVAQRSADG IEQRVHPSMV PKTSAIAQVM GVTNAVTIDA DAVHELTLAG PGAGGEATAS AIVADIADIA RGVRSAPFGL PVAALTSLPR PPMRLHQGGY YIRLSVEDRP GAAAAIAKRM AEREISLESI VQRRRPGTIA SGAVPVILVT YATHEQTVRE ALDAVVADGY LAAKPQLIRI ERE
|
| |