| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1102 |
|---|
| Symbol | |
|---|
| ID | 6200687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1267875 |
|---|
| End bp | 1271912 |
|---|
| Gene Length | 4038 bp |
|---|
| Protein Length | 1345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641705094 |
|---|
| Product | non-ribosomal peptide synthetase |
|---|
| Protein accession | YP_001832233 |
|---|
| Protein GI | 182678087 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain
[TIGR02353] non-ribosomal peptide synthetase terminal domain of unknown function |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0166801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.534477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGAT TTTCCGCGGT GACTTCCCTG CCCCCTCTGG AGAATGGCGA CGAAAGGGTC
CGCGAGGGCA TCCTTCAGGG TGCGAAACGT CTCGATCTCC TGCGCGATGA ACTGCTGGCC
GAAATTTTCG CCAAAACCGT CGCTGCGCAG CCGTCCACCA TCGCCATGGT GACGGAAGCT
GGCACGCTGA CTTATGCCGA ACTCGATGCC AAAGCGGAAA TTTTAGCCCG GGGCCTCGTC
GCCCAAGGTC TGCGGCCAGG CCAGATCATC GGCTTGTGGA TGCCGCGTGG CCATGAACTT
CTGGTCTCGC AGATCGCCGT CGCCAAAACC GGCGCCGCCT GGCTGCCCTT CGATGCCGAT
GCCCCGGTCG AACGCATCGG CATCTGCCTT GCGGACGCGG AGGCCTGGGG CCTTCTCACC
GCCGAGGCCT TCACCTACAA GATTGATGAG ACTATTCCCT GTCCGGTCGT GACCCCGGCC
AAGTTGATCC CAGCCAGCGG AGACCTCAAG GGCGGCGTTA AGGTCAATGC CCGCGCTTTG
GGTGCGACGC CCGATCATCC TGCCTATCTC ATCTATACCT CGGGCTCCAC CGGGACGCCC
AAGGGCATCG TCATTTCCGG CCGCAACATT TGCCATTACC TGCGTTCGGC CAATGAGGTC
TATGGGCTCA AGGCGAGCGA CGTCGTCTTC CAGGGTGCCT CGGTTGCCTT CGACCTGTCG
ATGGAAGAAA TCTGGCTGCC CTATCTCGTC GGCGCCAGCC TCTTCGTCGC GACGCCACAG
ATGATGGGCG AGGTCGACAA GCTCCCGGAG CTGATGGAGT CCCACGGCGT CTCTGTGCTC
GACACTGTGC CGACGCTGCT CTCTTTGCTG CCGCGCGATG TTTCGACCCT GCGCTTGATC
ATTCTCGGCG GCGAAGCCTG CCCACCCGCC ATCGCCAATC GTTGGTGCCG GCCGGGACGG
CATGTTTTTA ATTCCTATGG GCCGACCGAG GCCACGGTCG TCGCCACAGT GGCGGAAGTC
CATCCGGGCG AGGATGTGAC GATCGGCCAG CCGTTGCCCA ATTACTGCTG TTATGTCGCC
GATGAGGCCC TGACCCTGCT GCCCAATGGA CAGGAAGGCG AATTGCTGAT CGGCGGCCCT
GGCGTTGCCC AAGGCTATTT GAAACGCGAG CATCTGACCG CGCAGAAATT CATCGCCAAT
CCTTACGAGA CGGACGCTGA CGCCCCCCTG CTCTATCGCT CCGGGGATGC GGTTCAGATC
GATGGCAATA GCAATCTCGT TTTTCGTGGA CGCATTGACG ATCAGGTCAA GGTTCGCGGC
TTTCGCGTCG AACTCGGCGA GATCGAGGCG AAGCTCGCCG ATTGTCCGGG CATCGCCCAG
GCTGCCGTCG TCCTGCGCCA GGATGCCGGC CTTGAACAGC TCGTCGCCTT TCTCGTGCCC
ACTCCTGGCA GCGCAATCGA TCCGGCCTCA ACGAGGCAGG AGCTGCGCGC CACTCTGCCC
CCCTATATGG TCCCCGCACG TTTCGAGGCG ATCGAAACCC TGCCGCGACT CTCGTCTGGC
AAGGTCGATC GCAAGAGCCT GAAACAGCGC GAGCTTTCGC AAATCCAGGA TCAAGACGCG
CAGGAAGTTC CCCGCAACGA GACGGAAGCC TGTCTGCTCG AGGCTGCCAA ACGCGTCTTG
CCGCCGCAGC CGATCCCGCT CGATGCCGAT TTCTTCACCG ATCTCGGCGG CCATTCCCTG
CTGGCGGCCC GATTCATCTC GCTGGTCCGG GAAACGCCGG CGCTCGCCGG TATCACCTTG
CAGGATGTCT ATACCGCCCG CAGCCTGCGC GGCATGGCGG AACTGCTGCA AGGCAAGCTC
GCCGCTGGCC CGGAGGCCTC TCTGGCCTTT GACCCTCCGC CCCTCCTGCG GCGGTTTCTC
TGCGGCCTCG CTCAGGCCGT AGCCCTGCCG GTCATCATCG CGCTCATCAC CGCGCAATGG
CTCGGCGTTT TCGTCAGCTA TATGTTGCTG ACCGGCGCCG ATGCCACTCT GTTTGAGGAA
ATCGTCTCGC TGATCGGCGT CTATATGGCG ATCAATATCA GCACGGTGCT GATCGCCATT
GCCGCCAAAT GGCTGATCAT TGGCCGCACC AAACCCGGCC GCTATCCCCT CTGGGGCGTC
TATTTTTTCC GCTGGTGGCT CACCAAAAGA TTTCTCGGCC TCGTCCATCT GAAATGGTTC
CAAGGCTCGC CGATCATGCG GCTTTATCTG CGCGCGCTCG GCGCCCAGAT TGGCAAGGAT
GCCCTATTGG GCGAGATCGA GGCCGGCGCG CCTGATCTGA TCAGCATTGG CTCGAGGGTC
AGTATCGGCT CGGTCGGCAA TTTCGCCAAT GCGCGGGTCG AGGGCAATGA ACTTGTCATT
GGCCCGATCA CCATCGGCGA CGATGCCTAT ATCGGTTCCT CCTGTGTCCT TGAAAACGAT
GTGGTGATCG GCGAAGGAGC GGCGCTCGGA GATCTGACGG CCTTGCCGGC CGGCACGACA
ATCGGCGCCT GGGACAATAT TGATGGTTCG CCCGGCAAAA AGATTGGCAC GGTCGATCGC
GCGGACCTCG GGGAAGCTCC TAAAGCCTCG GCTCCGCGCC GCTTCCTTCT CGGCCTTGGC
TATCTCCTCG CTTTGCTCAT CATCCCCCCG CTCGGGCTGA TGCCAATCAT TCCAGCCTTC
TGGGTATTCG ATCGAATCGA CGAATTGATT GGCTCCGCTG TGATCGATCA TTTCGTCTAT
ATGGCCACGA TCCCTGTCAT GGCCTGGCCA ACCGCGTTCG TCATGGTGCT CGTCACCGTG
GGCTTCATCG CGCTTTGCCG CTGGATCATC CTACCGCGTG TGCGGGAGGG TCGTTATTCG
ATCCATTCCT GGTTCTATTT CCGCAAGTGG CTGATGACGC TCGCAACCGA GGTCACGCTG
GAAACCCTGT CGGCGCTCTA TGCCACGGTA TATATGCGGG CTTGGTATCG CCTCATGGGT
GCCAAGATCG GCAAGGATGC GGAGATTTCC ACCAATCTTT CCGGCCGCTA CGATCTCGTG
GAAATCGGCG AGAAATGTTT CATCGCCGAT GAAGTCATGC TGGGCGATGA GGAAATCCGC
AACGGCTGGA TGACCCTGAA ACGGGTGCGG ACGGGGGCCC GCGTCTTCGT CGGCAATAGC
GCCGTGGTTC CGGCGGGCGC GGATATTCCC GCCAATGCGC TCATCGGCAT CAAGTCGAAG
CCGCCAGCCA ATGAACTCAT GCACGAGCAT GATACGTGGT TCGGCTCGCC ACCGATCAAA
TTGCCGGTGC GGCAGAAATT CGACACGGGC GGCGCGACCT GGACCTATGA AGCACCACGT
TGGAAGAAAT TCGCGCGTGG CTGTTTCGAG GCGGTGACAA TCTCGCTGCC GACCATGTTG
TTCATCACCT TCGGCACCTG GGCCACGGAT TGGTTCTCAA AAAGCGTGCT GGAAGGTCTT
TATTTCGAAA TTCTCTGGGC TTTCACCCTC TCCTCAGTGG CGATCACTTT GGGACTCGCT
TTTGTCGTCA TCATCATCAA ATGGCTGAGC ATGGGTCGCT ACGAGCCCGT GACCAAACCC
ATGTGGTCAT TCTGGGCGAT GCGAACGGAA GCCGTGGCCG TCATGTATTG GGGTCTCGCC
GGCAAGGTCC TGCTCGATCA TTTGCGCGGC ACGCCCTTCC TGCCGTGGCT TTTGCGCCTG
TTCGGCACGA AATGCGGACG CGGCATTTAC ATGGATATGA CGGACATCAC TGAATTCGAT
TGCGTCACCA TCGGCGATTT CACCGCGTTG AACGCCCTTT CGGCCTTGCA GACTCATCTC
TATGAAGACC GCGTGATGAA AGTCGGCCGC GTCTTCGTCG GCAAGGGCGT CACCATCGGC
GCCGGCTCTA CGGTCCTTTA TGATACGCAT GTGTCCGATT ATTCCCGGCT CGGGCCACTG
ACCCTGGTCA TGAAGGGAGA AAAAATCCCG CCGCTGACGG AATGGACAGG TGCGCCGGCG
GAGCCGAAGA GCTTGTGA
|
|---|
| Protein sequence | MARFSAVTSL PPLENGDERV REGILQGAKR LDLLRDELLA EIFAKTVAAQ PSTIAMVTEA
GTLTYAELDA KAEILARGLV AQGLRPGQII GLWMPRGHEL LVSQIAVAKT GAAWLPFDAD
APVERIGICL ADAEAWGLLT AEAFTYKIDE TIPCPVVTPA KLIPASGDLK GGVKVNARAL
GATPDHPAYL IYTSGSTGTP KGIVISGRNI CHYLRSANEV YGLKASDVVF QGASVAFDLS
MEEIWLPYLV GASLFVATPQ MMGEVDKLPE LMESHGVSVL DTVPTLLSLL PRDVSTLRLI
ILGGEACPPA IANRWCRPGR HVFNSYGPTE ATVVATVAEV HPGEDVTIGQ PLPNYCCYVA
DEALTLLPNG QEGELLIGGP GVAQGYLKRE HLTAQKFIAN PYETDADAPL LYRSGDAVQI
DGNSNLVFRG RIDDQVKVRG FRVELGEIEA KLADCPGIAQ AAVVLRQDAG LEQLVAFLVP
TPGSAIDPAS TRQELRATLP PYMVPARFEA IETLPRLSSG KVDRKSLKQR ELSQIQDQDA
QEVPRNETEA CLLEAAKRVL PPQPIPLDAD FFTDLGGHSL LAARFISLVR ETPALAGITL
QDVYTARSLR GMAELLQGKL AAGPEASLAF DPPPLLRRFL CGLAQAVALP VIIALITAQW
LGVFVSYMLL TGADATLFEE IVSLIGVYMA INISTVLIAI AAKWLIIGRT KPGRYPLWGV
YFFRWWLTKR FLGLVHLKWF QGSPIMRLYL RALGAQIGKD ALLGEIEAGA PDLISIGSRV
SIGSVGNFAN ARVEGNELVI GPITIGDDAY IGSSCVLEND VVIGEGAALG DLTALPAGTT
IGAWDNIDGS PGKKIGTVDR ADLGEAPKAS APRRFLLGLG YLLALLIIPP LGLMPIIPAF
WVFDRIDELI GSAVIDHFVY MATIPVMAWP TAFVMVLVTV GFIALCRWII LPRVREGRYS
IHSWFYFRKW LMTLATEVTL ETLSALYATV YMRAWYRLMG AKIGKDAEIS TNLSGRYDLV
EIGEKCFIAD EVMLGDEEIR NGWMTLKRVR TGARVFVGNS AVVPAGADIP ANALIGIKSK
PPANELMHEH DTWFGSPPIK LPVRQKFDTG GATWTYEAPR WKKFARGCFE AVTISLPTML
FITFGTWATD WFSKSVLEGL YFEILWAFTL SSVAITLGLA FVVIIIKWLS MGRYEPVTKP
MWSFWAMRTE AVAVMYWGLA GKVLLDHLRG TPFLPWLLRL FGTKCGRGIY MDMTDITEFD
CVTIGDFTAL NALSALQTHL YEDRVMKVGR VFVGKGVTIG AGSTVLYDTH VSDYSRLGPL
TLVMKGEKIP PLTEWTGAPA EPKSL
|
|---|
| |