| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1045 |
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| Symbol | |
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| ID | 6199508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 1198569 |
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| End bp | 1199471 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641705038 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001832177 |
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| Protein GI | 182678031 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.128429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTC CCCGTTCCAA ACGCGTCGAG GTCAATGGCT GGGTCGTGCT CGACAAGCCC
ATCGGAATGA CTTCAACTCA TGCCGTTTCC CGTCTGAAAC ATATTTTCAA CGGCAAAAAA
GCCGGCCATG CTGGCACACT CGATCCCTTG GCTTCGGGCA TTCTGCCCGT AGCCTTCGGC
GAGGCGACCA AAACCGTGCC CTATGTCCAG GATGGGGAAA AAGCCTATCG GTTCACCATC
CGCTTCGGCG CCGAAACCGA TACGGATGAT TCTGATGGGC GCATTACCTT GCAATCCGAG
GCACGCCCCT CCCCCGCCGA ACTAACTGCT TTGCTGCCGC GCTTTCTCGG CACGATCGAG
CAACGTCCTC CGGCCTATTC CGCGATCAAG ATCAATGGTG AGCGTGCCTA TGATCTGGCC
CGCGACGGAG AAATTCCAGA TATTGCGCCA CGCCTCGTGA CGATTCACGC GCTCGATCTC
GTCAACATGG ACGGGGACGA AGCCGTTTTG GAAGCACGGT GCGGCAAAGG CACATATGTG
CGCGCCATCG CCCGCGATCT CGGCCGTCTG CTCGGCTGCT ACGGCCATGT CTCGGCTTTG
CGGCGCACGC GTGTTGGCCC CTTCCACGAA GACGACGCCA TCCCCCTTGC CTCCCTCGTG
GAAGGTACGG CGGAGAGGCA AGGCATGCGC GGCATCGAAG CCGGCCTGAC TGAAATGCCC
CGCATTCCAG TTGATCGCTC GACCGCGGCA AAGCTGCGGC GCGGACAATC CATTCTGCTG
CGCGGCCACG ACATCCCCAC TGAGGGACCT GCCTATGCGG CCTGCGGCGA CGTGATCATC
GCGGTTGGTG CGGTGGAAAG AGGTGAACTC ATTCCAGGCC GTGTTTTCAA TCTGCCGTTC
TGA
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| Protein sequence | MNAPRSKRVE VNGWVVLDKP IGMTSTHAVS RLKHIFNGKK AGHAGTLDPL ASGILPVAFG
EATKTVPYVQ DGEKAYRFTI RFGAETDTDD SDGRITLQSE ARPSPAELTA LLPRFLGTIE
QRPPAYSAIK INGERAYDLA RDGEIPDIAP RLVTIHALDL VNMDGDEAVL EARCGKGTYV
RAIARDLGRL LGCYGHVSAL RRTRVGPFHE DDAIPLASLV EGTAERQGMR GIEAGLTEMP
RIPVDRSTAA KLRRGQSILL RGHDIPTEGP AYAACGDVII AVGAVERGEL IPGRVFNLPF
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