| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0886 |
|---|
| Symbol | |
|---|
| ID | 6200625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1009312 |
|---|
| End bp | 1010154 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641704884 |
|---|
| Product | transglutaminase domain-containing protein |
|---|
| Protein accession | YP_001832025 |
|---|
| Protein GI | 182677879 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.335209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.197216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATTC GGTACGGATA TGAATTGACC TTCAATTGTC CCCGGCCGAC CCTGATGCTG
TGCCTTCTTG ACGCCCATCC CGAACGGTCG CAGGAAATCC GCTACGAGGT CGCGCCAACC
TTTCACCCGC CAATCCCGAC GACGGTCTAT GTCGATTCAT TCGGCAATTA TGTGCGCAAA
TTCGTGGCAC CCGAGGGCAA TATTACCTTG ACCGCCGATG CGATCATCGA GGACAGCGGC
CTGCCCGATC CCGTCATGCT CGATGCAGGG GAAGTCCCCC TCGAAGAAGT GCCGAACGAA
TTTCTCCTCT ATCTTCTCGG CAGCCGCTAT TGCGAGACGG ACAAGCTCAG CAATATTGCC
TGGGACCTGT TCGGGGCGAC ACCGCCCGGC TGGCGCCGGG TGCAGGCCAT TTGCGATTTT
GTCTGTGATC ATTTGACCTT CGGGTATCAA TTTGCCCGTG CAACCCGTAC CGCTGCGGAA
GCTTTCGAGG AACGCCTGGG CGTCTGCCGC GATTTCGCGC ATCTCGCCGT CACTTTCTGC
CGCTGCATGA ATATTCCCGC CCGCTATGCC AATGGCTTTC TTGGCGACAT CGGCGTGCCG
CCGGATCCGG CGCCAATGGA TTACAATGCT TGGTTCGAGG CTTATCTCGA CGGGCGCTGG
TTCACTTTCG ACGCGCGCCA CAATATTCCG CGCATCGGCC GGATCACGGT GGCACGTGGC
CGCGATGCCG CCGATATCCC GCTCGCCACA TCCTTCGGAC CGCATCAGTT AACAATCTTC
AAGGTTTGGA CCCATGAGGT AAACGAGGAG GTCTTGCAGC AATTAATACG GCGTAGCGCT
TAA
|
|---|
| Protein sequence | MLIRYGYELT FNCPRPTLML CLLDAHPERS QEIRYEVAPT FHPPIPTTVY VDSFGNYVRK
FVAPEGNITL TADAIIEDSG LPDPVMLDAG EVPLEEVPNE FLLYLLGSRY CETDKLSNIA
WDLFGATPPG WRRVQAICDF VCDHLTFGYQ FARATRTAAE AFEERLGVCR DFAHLAVTFC
RCMNIPARYA NGFLGDIGVP PDPAPMDYNA WFEAYLDGRW FTFDARHNIP RIGRITVARG
RDAADIPLAT SFGPHQLTIF KVWTHEVNEE VLQQLIRRSA
|
|---|
| |