| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0354 |
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| Symbol | |
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| ID | 6198752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 401158 |
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| End bp | 402939 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641704346 |
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| Product | shikimate kinase., 3-dehydroquinate synthase |
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| Protein accession | YP_001831497 |
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| Protein GI | 182677351 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase
[COG0703] Shikimate kinase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG GCGTAAATTC GATTTCTCCC CCACAGCAAG AATACGCGCC GGACGACCGG
CGCGCTCATT CGATCATCTC CAGTCTTGGT TCACGTTCCC TCGTTCTCGT TGGATTGATG
GGGTCTGGCA AGACCTCGAC CGGACGCCGC TTGGCGCAAA GGCTCGGCCT TCCCTTCGTC
GATGCCGATG TGGAAATCGA ATCCGCTGCT GGCATGACGA TTTCCGAAAT CTTCGCGCGC
CACGGAGAAG ATTATTTCCG GGACGGCGAA CGGCGGGTCA TGGCGCGGCT TCTGGCCGAT
GGGCCCAAAA TTCTGGCCAC CGGCGGCGGC GCTTTCATGA ACGAGGAAAC CCGTTCCCGC
ATCGCCGAGA AAGGCGTATC GATCTGGCTC AAGGCCGATC CTGACGTCTT GTGGCGGCGC
GTCAAGAAAC GCCCACATCG GCCGCTTCTG CAAACGCGCG AGCCGGAAAA AACCTTGCAC
CGCCTGATGG AGCAACGCTA TCCGATCTAT GCGCGGGCCG ATATTGCCGT CGAATCGCGC
GACGGACCGC ATGATGCCGT AGTCGAGGAC ATTCTGACGG CACTCGAGTT TTTCCTGCGC
TTCTCGCCCA ATCCGCCGCT CCCCCCACCC GGAACGCTCA ACCCCTCTTT TCTTGGACAA
GATTCCGCCT TGACCGAACT GGTTCCCGTT GAACTCGGCG CGCGCGCTTA TGAGATCCAT
ATTGGTCCCG ACCTCATTGC GCGGGCTGGA TCCCTGATTG CCGCTCTGGC CCCGAAAGCC
GCCTGCGCCG TCATCACCGA TGATAATGTC GCGCGCGAAC ATCTGCCCCG GCTGGAACAG
GCCCTCGCGC AACAGGGCAT AAGATATGAG ACCATCAAAG TGCGGCCGGG CGAAGGGTCG
AAATCCTTTC CGGTCTATGC CGAGGTCTGC GACGCCGTCA TCGCCGGTAA ATTCGAGCGG
CAGGATCTCA TTCTCGCGCT CGGCGGCGGC ATTGTCGGTG ATCTCGCCGG ATTTGTCGCG
GCAACGGTGC GGCGCGGCAT GCGCTTCGTT CAATTGCCCA CGACTCTCCT GTCACAGGTC
GATTCCTCGG TCGGCGGCAA GACTGGCATC AATTCACCAC ATGGCAAGAA TCTGGTCGGG
GCCTTTCATC AGCCCTCGCT GGTTCTCGCC GATACGACCG CGCTTGAAAC CCTGCCGAAA
CGTGAGTTCC GAGCGGGCTA TGCGGAAGTG GTCAAATATG GCCTGATCAA CGATCCCGAT
TTCTTCTTCT GGCTCGACAT GCATTGGCCA AACGTCTTCC AGGGGGGAGC GGATCGTGTG
CATGCCATTG CAACAAGTTG CAGAGCCAAG GCGGCCATCG TCAAACGGGA TGAATTGGAA
ACCGGGGAAC GGGCTCTGCT CAATCTCGGT CATACATTCG GGCATGCTTT CGAGGCCCTG
ACGCATTTCG ACAATGCGCG TCTCGTCCAT GGCGAAGGCG TCGCGATTGG CATGGCTTGC
GCCTTTCGCT TTTCAGTCAA GCGCGGTCAT TGTTCCCCCG AGGATGCCGC GCGCGTGGAC
AATCACTTGC GCATGGTGGG TCTGCCGACA CGTATTCGCG ACATCAAAGA TTTCGACGCG
GATGCCACGG CTATTCTTGC GGCCATGTAT CAGGACAAGA AAGTCGAGCG GGGGACTCTC
ACCTTCATTC TCGCCCGCGC GATCGGGCAT TGTTTCATCG AGAAAAAGAT CGAGGGAGAA
GAGGTCAAAG CCTTCTTGGA AGAGGAACTG ATGCTCTCCT AG
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| Protein sequence | MSDGVNSISP PQQEYAPDDR RAHSIISSLG SRSLVLVGLM GSGKTSTGRR LAQRLGLPFV
DADVEIESAA GMTISEIFAR HGEDYFRDGE RRVMARLLAD GPKILATGGG AFMNEETRSR
IAEKGVSIWL KADPDVLWRR VKKRPHRPLL QTREPEKTLH RLMEQRYPIY ARADIAVESR
DGPHDAVVED ILTALEFFLR FSPNPPLPPP GTLNPSFLGQ DSALTELVPV ELGARAYEIH
IGPDLIARAG SLIAALAPKA ACAVITDDNV AREHLPRLEQ ALAQQGIRYE TIKVRPGEGS
KSFPVYAEVC DAVIAGKFER QDLILALGGG IVGDLAGFVA ATVRRGMRFV QLPTTLLSQV
DSSVGGKTGI NSPHGKNLVG AFHQPSLVLA DTTALETLPK REFRAGYAEV VKYGLINDPD
FFFWLDMHWP NVFQGGADRV HAIATSCRAK AAIVKRDELE TGERALLNLG HTFGHAFEAL
THFDNARLVH GEGVAIGMAC AFRFSVKRGH CSPEDAARVD NHLRMVGLPT RIRDIKDFDA
DATAILAAMY QDKKVERGTL TFILARAIGH CFIEKKIEGE EVKAFLEEEL MLS
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