Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0349 |
Symbol | |
ID | 6198753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 394223 |
End bp | 396025 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641704341 |
Product | cyclic beta-1,2-glucan ABC transporter |
Protein accession | YP_001831492 |
Protein GI | 182677346 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR01192] glucan exporter ATP-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.730063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGATAC TCTCCACTTA TTGGCGCGTC CTCCAGTTTC TCGGTGGCGA GAGACGTTTG GCACTCATTC TCGCTTTCGC CAATCTCGCT TTGGCGGCGG CGCAATTCGC CGAGCCGGTC CTGTTCGGCC GTATCATCGA TCGCCTGAGC AGCACCGAGG GCGCCGGTCG ATTTCCGACT TTTCAGGAAT TGCTGCCGCT GATTGGCGCC TGGGTCGGTT TCGGCCTGTT TTCAATCCTG GCGGCGGTTT TGGTCGCGCT TCACTCCGAC CGTTTGGCGC ACCGACGCCG TATGGCCGTG ACCGGCCTCT ATTTCGAGCA TGTGCTGAAC CTGCCGCTGA GTTTTCACGC GTCCGTCCAT TCGGGGCGCC TGTTGAAAAC CATGCTCGAT GGTTCGAGCG GCATGTTCGG CCTGTGGCTC TCCTTTTTTC GGGAAAATTG CGCCTCGCTG GCCGCACTGG TTTTTCTGCT GCCGCTCTCG CTCTTCCTGA ATTGGCGGCT CGGCTCGCTG CTCATCGTGC TGCTCGTGCT ATTTGGCTGC CTGATCGCTT TCGTGCTTCA CCGCACGCAT GCCTTGCAAC AATCGGTCGA GCAATACAAT AGTTCGCTGG CCGAACAGGC CTCCGACGCG CTCGGCAATA TTTCGGTGAT CCAGAGCTTC ACCCGCATCG AGCTTGAAGC CAATGCCTTG CGGCAAATCA TCGATCACGT GCTTGCGGCG CAAATGCCGG TCTTGAACTG GTGGGCTGTC GCCGCTGTTG GCGCCAGAGC CTCCGCCACC CTGGCCCTGC TGGGTATTTT CCTGCTCGGC ACCTGGCTCA ATCTGCGGGG CTTGGCAACG ATCGGCCAGA TCGTCACTTT CATGAATCTC GCGACCATGC TCATTGCTCG TCTGGAACAG GTGATCGGCT TCTTCAACAC ATTATTCCTG CAAGCACCGA AGATGCAGGA CTTCTTCAAA GTTCTCGATA CTGTTCCGCG GGTTGCCGAT AGTCCCAAGG CGATCGACCC CAGCCGCCTT CATGGACGCG TGTCATTTGA AAATGTGAGC TTTTCCTACG ACGGGCGCAA ACCCGCCGTC TCGCACCTTG CCTTCGAGGT AGCCGCCGGC GAAACCGTGG CTTTGGTCGG CGCCACGGGG TCCGGCAAAT CGACAACACT TGGCCTTCTC CATCGCGTCT TCGATCCGCA GGAAGGCCGC GTCACGATCG ATGGCTTGGA TATTCGCACC ATGAGCCTTC AGGGCCTGCG CCGGAATATT GGGGTCGTCT TTCAGGAACC GATGCTGTTT GCCCGCTCGA TCGAGGAGAA TTTGCGGGTC GGCAAGCCGG ATGCGACGCC GGCCGAAATA GCCTTGGCTT TGGAGCGCTC GCAAGCGGCG GATTTCGTCG CCCGGCAGGA GAATGGCCTT GCGACCATTG TCGGCGAGCG CGGCCGCTCG CTCTCCGGCG GCGAGCGTCA GCGCCTTGCC ATTGCCCGCG CCTTGCTCAA GGACCCGCCC ATCATGATCC TTGACGAGGC GACCTCTGCC CTCGACGCCA CGACTGAAAG GCAATTGCAG GAGGCTCTCG AAACGGCGAC CAAAGGGCGC ACGACGTTCA TCATCGCGCA TCGGCTGGCG ACGATTAGAG AGGCGAAACG AATTTTCGTC TTCGACCATG GCCATATTGT CGAAACCGGC AGTTTTGACG AACTCGTCGC ACTAGGGGGC CGTTTCGCCA CCTTGGCCAA AGCGCAATTC ATGGTTGGCG CCCGTCCCGA GGACCCGGAA ACGGGCGGCA AGCCGCCAAA ACCGTCGCCC TGA
|
Protein sequence | MSILSTYWRV LQFLGGERRL ALILAFANLA LAAAQFAEPV LFGRIIDRLS STEGAGRFPT FQELLPLIGA WVGFGLFSIL AAVLVALHSD RLAHRRRMAV TGLYFEHVLN LPLSFHASVH SGRLLKTMLD GSSGMFGLWL SFFRENCASL AALVFLLPLS LFLNWRLGSL LIVLLVLFGC LIAFVLHRTH ALQQSVEQYN SSLAEQASDA LGNISVIQSF TRIELEANAL RQIIDHVLAA QMPVLNWWAV AAVGARASAT LALLGIFLLG TWLNLRGLAT IGQIVTFMNL ATMLIARLEQ VIGFFNTLFL QAPKMQDFFK VLDTVPRVAD SPKAIDPSRL HGRVSFENVS FSYDGRKPAV SHLAFEVAAG ETVALVGATG SGKSTTLGLL HRVFDPQEGR VTIDGLDIRT MSLQGLRRNI GVVFQEPMLF ARSIEENLRV GKPDATPAEI ALALERSQAA DFVARQENGL ATIVGERGRS LSGGERQRLA IARALLKDPP IMILDEATSA LDATTERQLQ EALETATKGR TTFIIAHRLA TIREAKRIFV FDHGHIVETG SFDELVALGG RFATLAKAQF MVGARPEDPE TGGKPPKPSP
|
| |