| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0157 |
|---|
| Symbol | |
|---|
| ID | 6200859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 187010 |
|---|
| End bp | 187975 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641704153 |
|---|
| Product | putative sulfite oxidase subunit YedY |
|---|
| Protein accession | YP_001831304 |
|---|
| Protein GI | 182677158 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.337145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTCC ATCGCCGCCG TGGATGGGAA ATCGCCGCCT GCGAGGCGAC GCCCGAATCC
CTTTTTCTCA ATCGCCGCGC CTTTCTGCGC ACAAGCGTGG CTGCCGGAGC TCTTTTGACC
ACGGGCCTTT CAGAATTCGG CGGCACGGCC GATGCGGAGG GCTCCTCGGC TTCTCTTTAT
CCCGCCAAAA CCAATTCGAC CTATAGCTTG GACCGGCCGC TGACACCCGA GCGCGTCAAC
GCCCATTACA ATAATTTCTA TGAATTCGGC GCGACCAAGA ATGTCGCCGA GGCAGCGGAA
TCCCTCAGAA CAAGGCCCTG GACGCTCAAA GTCGATGGTC TTGTCGAGGC GCCACGCGAC
TATGCCATTG ATGATCTGGA ACGCACCTTT CCGCTGGAGG AAAGGCTCTA TCGCCATCGC
TGTGTCGAGG CCTGGTCCAT GACCATCCCC TGGACCGGCT TTCCCCTGCG CGCTTTGCTG
GATCAGGTCC GCCCTTTGTC GGGCGCGCGC TATGTCCGGA TGGAGACTTT TCACGACGCG
AAAATGGCGC CCGGCCAACG CCAGTTCTGG TATCCCTGGC CCTATGTGGA AGGGCTCACC
ATTGCCGAGG CCGGTCACGA CCTCGCCTTT CTCGTGACCG GAGCCTATGG CAAGCCTTTG
GGAAAAGTGT TCGGCGCCCC CCTGCGTCTC GCCGTGCCCT GGAAATACGG GTTCAAATCA
ATCAAATCGA TCACCCGCAT TTCCCTCGTC GCCGAGCGGC CCAAAACCTT TTGGGAACAA
TTGCAGGCTA GCGAATATGG TTTCTGGGCC AATGTGAACC CCGCCGTCGC GCATCCGCGC
TGGAGCCAGG CGAGTGAAGA GGTTATCGGC ACTGGCGAAC GAAGGCCGAC ACTGCTTTTC
AACGGTTATG GTGAGCAGGT CGCCTCGCTT TATGCGGGGC TCCAGAAGGA AGTGCTCTAT
CGATGA
|
|---|
| Protein sequence | MPFHRRRGWE IAACEATPES LFLNRRAFLR TSVAAGALLT TGLSEFGGTA DAEGSSASLY
PAKTNSTYSL DRPLTPERVN AHYNNFYEFG ATKNVAEAAE SLRTRPWTLK VDGLVEAPRD
YAIDDLERTF PLEERLYRHR CVEAWSMTIP WTGFPLRALL DQVRPLSGAR YVRMETFHDA
KMAPGQRQFW YPWPYVEGLT IAEAGHDLAF LVTGAYGKPL GKVFGAPLRL AVPWKYGFKS
IKSITRISLV AERPKTFWEQ LQASEYGFWA NVNPAVAHPR WSQASEEVIG TGERRPTLLF
NGYGEQVASL YAGLQKEVLY R
|
|---|
| |