| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0134 |
|---|
| Symbol | |
|---|
| ID | 6201724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 157457 |
|---|
| End bp | 159502 |
|---|
| Gene Length | 2046 bp |
|---|
| Protein Length | 681 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641704130 |
|---|
| Product | fusaric acid resistance protein region |
|---|
| Protein accession | YP_001831281 |
|---|
| Protein GI | 182677135 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.222528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.532934 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACATTAC CCAATTCCCG GGACTGGATT TTTTCGGTCA AGACATTCGC GGCGGCCTTG
CTCGCTCTGT ATATCGCCCT CATGTTTGAT CTGCCGCGTC CCTATTGGGC CATGGCGACG
GTTTATATCA CCAGCCAGAT GCTCGCCGGC GCGACACGGG CGAAAGCCGC CTATCGCATT
GCCGGGACGT TCTGCGGCGC GGCGGTCACG ATCCTGCTCA TTCCCAATCT GGTCAATGCG
CCGCTCCTGC TCTGTCTCGC CATCGCCCTA TGGGTCTCTT TCTGCCTCTA TTGCTCCCTT
CTCGATCGGA CGCCACGCAG CTACCTGTTC ATTCTGTCGG GCTATACGGC TGCGCTCATC
GGCTTTCCCG CGGTCGAGGA GCCGGGGACG ATTTTCGACA TCGCCGTTTC CCGCGCCGAG
GAAATTTCGA TCGGCATCAT CTGCGCCAGC CTGATGTCCG TTGTCATTCT GCCACGCACT
GTCGGTGAGG TCGTTGCCGA CCGTATCGAG GAATGGTGCG CCGAGGCGGA TCAATTGGTT
CTCAAGATTT GCGGCACGGA GGGGCTCGAG CAATTGCATA CGACCTTTCT ACGCCTTGCC
GGCGGGGTCC TGGCGCTCGA AGTTTTTCTC AAACAGATTG CCTATGAGGC TTCCATCAAG
AGACACTCGG TCGAAGCCTT GGCGATTTTG CGCCAGCATA TGCTGGTGCT GCTGCCCATC
GCTTCAGGAA TCTCCGACCG TATCCGGATT CTCAAACACC TTTCCGCATT TCCCACGGAG
GCGGATCATC TGATCGCGGA TCTGAGGAAA TGGCTGCAGG GCGATGATAC ATCCGCTGTT
TCGCCGATGA TCCTGCGTGC CACGGCCGAA GCGGCGAAAC CAGCGCCGAC CAAGGATTGG
AACACGCTTC TCTCCCTGAG TCTCATCGCG CAGATCGAGC ATTTCATTGA TCTGCAGGAA
GATATTCGCC GGCTCAAGAA GCATGTCATC AATGGAACGC GACTGCCGGA GCTGAAATGT
CCCTATATAC GTTCGACGCT AAACATTCGT CATCGTGATC ACACTCTGGC TTTCCGCTCC
GCCCTGAGTG CCTTTGTCAG CATCCTCGTG ACCTGCGGCT TCTGGATCCT CACCGGCTGG
TCGAACGATG GATCGGGGGC CCCGATGATG GCGGCGGTCG CCTGCTGTTT CTTCGCGACC
ATGGACGATC CCGCACCCGC GATTTTAAAA TTCGCAAATT CGACGATCAT TGGCGCGCTT
TGGACGGCTA TCTATTTATT CGCTTTGTTA CCCCGCGTGA CCAATTTCGA AATGCTGGCC
CTCATGCTGG CACCGGCGCT TCTCCTGTGC GGGGCCTTGA TGCATCATCC GAAAACGGCC
CTTTCCGCAA TGGGTGCCGC GGTGATCGGC CTGACGCTGC TCGCGCTGCA TTCGGCTTAT
GGCGCCGATT TCGCGGTCTT CGTCAATTCC GCTTTTGCGG TCACGAGCGG CATGTGGATC
GCGGCGATCG TCACCCGGCT GATCCGCTCG GTGGATGAAA CCTGGACCGC GCGCCGGCTC
GTCAATCTCA ATCGCTCCAT GCTGGTCGAG GTCGCAGACG GACATAGGCG CCGTGGTGGC
TTCGAGATCG CCGCCTTGAT GCTCGACCGT CTTGGTCTCA TTTCCACGCG CTTGAAAACG
GCGCGAATAG CCGAGGAACT GCAGCCGGAA GTGTTCCTCG CGGAAATTCG CGCGGCGATC
AATATTGCCG AGATCAAACA GGCCCGGCGC CGTCAGCCGG AGGCAATCAG GCGAGCCATC
GACCGTATCC TGAATGCCGC CATCGGGCAT TTCGGTGGCC AGGTCCATAT GAAAACACGA
ACGCTTCTGG AGGAAATCGA CGCCGGACTC ACTATCATTC CCGTCGATGA AGAACAAGAT
TTGTGTGCGC GGCTCGTCGG TCTGCGCGTG GCTTTGTTTC CCGACGCGCT CCCCTATGCT
CCGCCATCAG AGCGAATACA GGATAAAAAC AACCCTCTTC TCCTGGAGCC GGTTCAACGA
CCCTGA
|
|---|
| Protein sequence | MTLPNSRDWI FSVKTFAAAL LALYIALMFD LPRPYWAMAT VYITSQMLAG ATRAKAAYRI
AGTFCGAAVT ILLIPNLVNA PLLLCLAIAL WVSFCLYCSL LDRTPRSYLF ILSGYTAALI
GFPAVEEPGT IFDIAVSRAE EISIGIICAS LMSVVILPRT VGEVVADRIE EWCAEADQLV
LKICGTEGLE QLHTTFLRLA GGVLALEVFL KQIAYEASIK RHSVEALAIL RQHMLVLLPI
ASGISDRIRI LKHLSAFPTE ADHLIADLRK WLQGDDTSAV SPMILRATAE AAKPAPTKDW
NTLLSLSLIA QIEHFIDLQE DIRRLKKHVI NGTRLPELKC PYIRSTLNIR HRDHTLAFRS
ALSAFVSILV TCGFWILTGW SNDGSGAPMM AAVACCFFAT MDDPAPAILK FANSTIIGAL
WTAIYLFALL PRVTNFEMLA LMLAPALLLC GALMHHPKTA LSAMGAAVIG LTLLALHSAY
GADFAVFVNS AFAVTSGMWI AAIVTRLIRS VDETWTARRL VNLNRSMLVE VADGHRRRGG
FEIAALMLDR LGLISTRLKT ARIAEELQPE VFLAEIRAAI NIAEIKQARR RQPEAIRRAI
DRILNAAIGH FGGQVHMKTR TLLEEIDAGL TIIPVDEEQD LCARLVGLRV ALFPDALPYA
PPSERIQDKN NPLLLEPVQR P
|
|---|
| |