| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1637 |
|---|
| Symbol | |
|---|
| ID | 6202716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1816080 |
|---|
| End bp | 1818371 |
|---|
| Gene Length | 2292 bp |
|---|
| Protein Length | 763 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641703149 |
|---|
| Product | catecholate siderophore receptor Fiu |
|---|
| Protein accession | YP_001830318 |
|---|
| Protein GI | 182682158 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.824429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTCA TTAAGAGTCG CAAACACCTC ATCACAGCAA CGGCCAGCAG CCGCCACCTC
ACCGCAGCTG CCCTACTGTC CTCTTTCTCA TTCTCATTCT CATTTGTCGC TCAGGCACAA
GCGATCCCAA TCACCACGCT CGACAAAATT GACGTACAAG CTGAACAACT AAAACGCTAT
TCCGCAGACA AACCTACCTA TGGCAAGTAC ACCCAACCAC TGATCGACAC CACCCAGACC
ATTAACATCA TTGGCAAAAC TCTGTTCAAC GAACAAGGCG CCACCTCACT CACCGAAGCA
TTACGCAACA GCCCGGGCGT AGGCACCTTC TACGTCGGCG AAAACGGGAC CACCTCAAGA
GGTGACAGCG TCTATATGCG CGGCTTCGAC AGTTCCAGCA GCATCTATGT CGATGGCATC
CGTGACCTTG GCTCAATCAC CCGGGACGTC TTCAACCTGG AACAAATAGA AGTCACCAAA
GGCCCGTCTG GACCCGACTA CGGACGTACT TCGCCGACTG GCGCGATTAA CCTGATCACC
AAACAGCCCT TTCTACACAA TGCCAACACT GCAAGCATCT CCTATGGCAC AGCTTCGCAA
CGCCGCATCA CCAGCGACCT TAATCTCATT GTCAGCCCTG ATTCGGCATT CCGCTTAAAC
ATCATGGGAC AAGACATCGG GGTTCCAGGA CGCAACAATG TCAAAAACAA ACGCTGGGGT
CTGGCCCCAT CAGCAGCATT TGGCCTGGGA ACCAGCACCC GCGTATTCGT CAATTTGCAA
TATATCAACC AGAACAACAT TCCAGACGGC GGCGTGCTCA CCATTGGCTT ACCCGGCTAC
AGCACCCCAG ACAGCACACG GACACAAATC AGCGCCGCAC CGCGCGTGGA CAGCAAAAAC
TTCTATGGAA CCGGATCAGA TTTCGAACAT GTGAAATCGT CCATGACAAC CGTACGTATT
GAGCACGATA TCAATGACAA AACGAAACTG CAAAATACCT TGCGCTGGGG TCGCAACGAA
CAGAGTTACC TACTGACCTC CTACCGCGGC AACGTAGAGA ACTTAATAAC ACCGGACCTA
GCCGATCCTT CGACCTGGAC AATCAACCGT GAAATACCAA TATTCAAGAA TCAAACCAAC
ACGATTTTGA CCAACCAAAC CAACCTTAAT CTGACTCTGA AAACCGGCCC GATCGAACAC
AACATCGCCA CTGGTATGGA ACTGACCCGT GAACGGATGC AAGGCTACGG TATCAGCAGC
AGCGGTCGCT GGCCGGCAGC CAACCTGTAC CACCCGGACC CGGACGTCAG CGGGCTGCAC
TGGGCAGCCA ATGGCGCCTA TGCCAACGGA CGTACTGATA CCACCGCGTT TTACCTGTTC
GATACACTTA AGCTCAATCA GCATTGGCAG CTCAACAGCG GCCTGCGCTG GGACCGCTAT
AACACCGACT ATGCGGCACT GCTCTGCGAC CCAGTACGTA GCCGCATCTA CTGCAACACA
ACACCTATCA CACTCAATCG GTTCAATGGC AACACGTCCG GGACGCTGTT CGGCTGGAAA
ACGGGGATAT TATTTAAACC CACCAAACAC AGCAGCCTCT ACATCAACTA CGCCGTGTCC
CAACAACCAC CCGGAGGTTC CTCACTGGAT CTCAGTGCCA AACCCCAGGA TGCCAATAAC
CCGAAGTACC AACCACAAAC GGCACGCACC GCAGAAGCAG GTGTGAAGTG GAACTCGTCT
CAAGAAGGCT TGCAACTGAC CGCCGCCATA TACAACACCC AGGTCAAAAA CGACATCGTG
CAAGACCCCA TCGACCTACA GTATTACCAA AATGGTAAGA AACGCGTGCG CGGTGTTGAA
CTCAGCGCAG TCGGCAAAAT CACCAATGCC TGGTCAATAT CGGCAGGGTT CACTACGATG
GACGCCAAAG TCAAACAGGG ACCCTCGGTC TCGGCCGACG GTTCACCCAC ACTTGCTTAC
ACGCCCAATC AAGCATTCAC CGCCTGGAGC ACATACACCC TCCCATTTGG CCTGACCATC
GGCGGTGGCG CACGCTACGT CGGAGAAATG AAACGCGACA GTAAAACCGC GATCGGGACG
CCAACCTATA TCAAGAGCTA CTGGGCCCTA GACATGGTAC TTAGCTACCG CCTGAACGAA
CACCTGGATC TACGGCTGAA CAGCTACAAC TTGTTAAATA AAGACTACGT CGCAGCGATC
AACAAGAGTG GCTATCGGTA TGCACCAGGG ATCCCACGTG CGTTTCTACT GACAGCAAAC
TTCCACTTCT AA
|
|---|
| Protein sequence | MPFIKSRKHL ITATASSRHL TAAALLSSFS FSFSFVAQAQ AIPITTLDKI DVQAEQLKRY
SADKPTYGKY TQPLIDTTQT INIIGKTLFN EQGATSLTEA LRNSPGVGTF YVGENGTTSR
GDSVYMRGFD SSSSIYVDGI RDLGSITRDV FNLEQIEVTK GPSGPDYGRT SPTGAINLIT
KQPFLHNANT ASISYGTASQ RRITSDLNLI VSPDSAFRLN IMGQDIGVPG RNNVKNKRWG
LAPSAAFGLG TSTRVFVNLQ YINQNNIPDG GVLTIGLPGY STPDSTRTQI SAAPRVDSKN
FYGTGSDFEH VKSSMTTVRI EHDINDKTKL QNTLRWGRNE QSYLLTSYRG NVENLITPDL
ADPSTWTINR EIPIFKNQTN TILTNQTNLN LTLKTGPIEH NIATGMELTR ERMQGYGISS
SGRWPAANLY HPDPDVSGLH WAANGAYANG RTDTTAFYLF DTLKLNQHWQ LNSGLRWDRY
NTDYAALLCD PVRSRIYCNT TPITLNRFNG NTSGTLFGWK TGILFKPTKH SSLYINYAVS
QQPPGGSSLD LSAKPQDANN PKYQPQTART AEAGVKWNSS QEGLQLTAAI YNTQVKNDIV
QDPIDLQYYQ NGKKRVRGVE LSAVGKITNA WSISAGFTTM DAKVKQGPSV SADGSPTLAY
TPNQAFTAWS TYTLPFGLTI GGGARYVGEM KRDSKTAIGT PTYIKSYWAL DMVLSYRLNE
HLDLRLNSYN LLNKDYVAAI NKSGYRYAPG IPRAFLLTAN FHF
|
|---|
| |