| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1570 |
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| Symbol | |
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| ID | 6202661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 1742752 |
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| End bp | 1744386 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641703081 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001830252 |
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| Protein GI | 182682092 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTTG ACCGTTTCCT CCCCCTAGTG TTTGGACTGC ACTGTTTTGC CGCAATGGGC
GGCACTGCTG ATGTCTTTCG AGTGTCACAG CTGTCCTCAT CAGATCTTTC CGAGCCGGTA
TCGGTGAAAA CGCTATGGGG CGAGGTGCAA CGTCCCAGCC TACCTACCCA CGTGTGTACG
GTATTGCCTG CGCGCCTGAC TCCTAAACAT GGCTCCATTG ACGCACTCGA TGCCAATCCA
AAGGTTTCCA AGCCTGATAC CAAGCGTTTA CAGGATGCCA TTGATGATTG TCCCGCCGGT
AGCGCGGTCA AACTAGTGAT CGACAGTCAT CGCAAATCCG GCTTTTTGAG TGGGCCGTTG
CACTTGAAAT CTGGGGTGAC GTTGTGGATT GACGAGGGTG TTACGCTGTT TGCATCGCGC
AACCCCAAGG ATTACGACAA AGGCAATGGT ACGTGCGGTA CTGCAACGTC AACTCATGAG
TTCAGTTGTA TGCCTTTGAT CTCCGCGATC AACACCACCG GTAGCGGTAT CGTGGGTGGG
GGTGTCATTG ATGGGCGTGG CGGTAGCATT TTGACTGGCG GTAAGTATGC TCGGCAGCGT
ACCTGGTGGG ACCTGGCCTA TCAGAACAAG CGCCATGCAC TGCATCAACA GGTACCACGG
TTGATCCAAA TCAGGGGCGG TAACGACTTC ACGTTGTACC GTGTTGCCAT CGAAAATGCA
CCTAACTTCC ATGTGGTTGC TGATACGGTT AGCGGTGTCA CCGCATGGGG CATCCGCATC
CTGACCCCAA GCTTGGTCTA TACCACGCCG GGGTACCACT GTCCGCCCGG TACCACGCCG
GATGTTGTGA CGCCGGCGAC ATGCTTTACC CCGGACACGG TCAAGAACAC CGATGGCTTT
GATCCTGGGC AATCAAACCA CGTGCTGCTA GCGTACTCCT ACATCAGCAC TGGGGATGAC
CACGTTGCCA TCAAAGCGCG GGGCAAGATG CCAAGCTACG CTCTGAGCTT CTTACACAAC
CACTTTGGCT ATGGACATGG CATGTCCATC GGTAGCGACA CCGAGTCAGG TGTACACGAT
ATGGAAGTCA GTGATTTGAG TATCGACGGC TTTGACAGCC CTAACAGCAA TGGTTTGCAG
ATGAAATCTG ATGCCGATCA TGGCGGAGTG GTCGACCATG TCACCTACTC CAAAATATGC
ATGCGTCGTC TGAAACGTCC GCTGGCGTTT GACACCTTCT ACAAACCTTC CAACGGGAAT
TCTTATCCAC TCTTCAAAAA TATCGTGCTG CAAGATATTC ATGTGCTTGA AAGTCCTGTC
TTTGGTGCTG GTCAGCTGCT TTTCATGGGG ATCCTGGGCA GTGGGAATAA TCTGCCAATG
ACGCTGAGCA TGGATAACGT CGTATTCGAC GGTTTTTTGC CAACATTGAT AGCGCCTCCC
AGCAGTGTCG TATTCGCCAA TCCGCAGGCA GTGCATTTTC ACTTCGGTCC CGGTCCGGTC
AGTTTCGCTC CTTTGATTAC CCCCTCGGTT GCTTACGATG TGACTGTGAG TGGAAGTCCA
GGTGTGGGCA ACCCATACGA TTGTTCGGCG GCATTTATCA ATTTTTCCAG CGTATTTCCT
GATTCGCCTA TCTAA
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| Protein sequence | MNLDRFLPLV FGLHCFAAMG GTADVFRVSQ LSSSDLSEPV SVKTLWGEVQ RPSLPTHVCT
VLPARLTPKH GSIDALDANP KVSKPDTKRL QDAIDDCPAG SAVKLVIDSH RKSGFLSGPL
HLKSGVTLWI DEGVTLFASR NPKDYDKGNG TCGTATSTHE FSCMPLISAI NTTGSGIVGG
GVIDGRGGSI LTGGKYARQR TWWDLAYQNK RHALHQQVPR LIQIRGGNDF TLYRVAIENA
PNFHVVADTV SGVTAWGIRI LTPSLVYTTP GYHCPPGTTP DVVTPATCFT PDTVKNTDGF
DPGQSNHVLL AYSYISTGDD HVAIKARGKM PSYALSFLHN HFGYGHGMSI GSDTESGVHD
MEVSDLSIDG FDSPNSNGLQ MKSDADHGGV VDHVTYSKIC MRRLKRPLAF DTFYKPSNGN
SYPLFKNIVL QDIHVLESPV FGAGQLLFMG ILGSGNNLPM TLSMDNVVFD GFLPTLIAPP
SSVVFANPQA VHFHFGPGPV SFAPLITPSV AYDVTVSGSP GVGNPYDCSA AFINFSSVFP
DSPI
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