Gene XfasM23_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_1494 
Symbol 
ID6202026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp1655022 
End bp1655414 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content37% 
IMG OID641703006 
Productglycoside hydrolase family protein 
Protein accessionYP_001830178 
Protein GI182682018 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.8674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTATG TTTTTATGAA AGCAACGGAA GGTGCAACAT TCCAGGATTC CAACTATGTG 
AGGTATCGTT GCGATGTGCT ATCTGCGGGT ATGACATCAG GAACTTATCA TTATTTCCGT
GCATTGAGCA GTACACCAAA AGCGCAGAGA GATAATATGG TTAATGTGCT GACTCAAAAT
GAATTTGATG CTTCATGTGA ATATTTTGCT TTGGATGTGG AGTTGATCGG CAATGAGAGT
GCAACACCAG AAGTGATGGG CGACAACCTT AATGATTTTG TTCTTCTGCT TGGGAAGAGT
TTATTTTTTT TGAATAGAAA GCAATTAATT TATTGCTCAA AAAATTTCTG GGATAAAAGG
ATAGCTGGAG ACAGAGATAA TTTTAGTGAA TAA
 
Protein sequence
MCYVFMKATE GATFQDSNYV RYRCDVLSAG MTSGTYHYFR ALSSTPKAQR DNMVNVLTQN 
EFDASCEYFA LDVELIGNES ATPEVMGDNL NDFVLLLGKS LFFLNRKQLI YCSKNFWDKR
IAGDRDNFSE