Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1444 |
Symbol | |
ID | 6202157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1595433 |
End bp | 1596548 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641702957 |
Product | TonB family protein |
Protein accession | YP_001830129 |
Protein GI | 182681969 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.232122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCAAC TGAAGATGAG CCGTACCGTA CCATTGAGCA CACCAATATT GCTTTTACTA GCGATGCTAG TGGCTTGTTC CAAGCAAGAC GATGAATCGG CTCCCGTTGC AGATGCACAA AGCACACCCA CTGTCCAAGG GACAGGATCA CCATCGCCAT CATCATCACA AAATATGGCT TTGGATCAGT TACACGAAGC CGCAACTCAA GCGCTACGTG ATAATCGAAT GTATGCACCC GCCGGAAACA ACGCCGTCGA GTACTACTTA GCACTCCGTG AAAAACAACC CCAAGACGCC ATCGTCAACA GCGCCTTGAC CGATTTACTA CCTTACACAC TCATCGCAGC AGAACAAAGC ATTCACCGGA AAGACTTCGA TGAAGCCAGA CGCTTGGTGA ATCTGATTGA AAAAGTGGAT CCCAACGCAC CAGCATTCCC ACGTCTAAAG CAGGCGTTAA TGAGCGACAC ACATACAAAA AAATCAAACT CTCAAAAAAT CGTAGAACAT AATTCCAATA AGAAAACCAG TGAGCAGGCA CACGAAAGGA TGGCTGAGCA ACGTGAAGTG GCCGAGCAAC GTGAAAGAGT CCGTCAGGAA ATAAACGATT TCGAACGTCA AACCCCAATC AAACGCGATG TTGAGCAGCG CACCACACAA CAACTTAGCT CACCAGTAGC GGTGCCGATA CTGATACAGC CTTCAGTCAA AACACAAGGA TCTGCAGCTG CTATCACTAC AACAACCCCC ACAACAACAA TACCCACAAC GACACCACAG ACACCTATAA CAACAGCTGT ACCTGCAACA ACACAGGGAA CTGCACTCTC ACCCATATCG GTAAAAGCTC CCCCTATAGC ACCAAACCTA CGGCCGATCA GTACGCCAGC ACCAAGGTAT CCGACAGAGG CGCTACGCGC CGGTATCTCG GGGGAAGTGG TGGTGGAAAT CAAAGTAAGC ACTGACGGCT CAGTCGCCAA TGCAAGGGTG GTGCAATCCA CACCAGCTCG CGTATTTGAT CGAGAGGCAC TGCACACAGT CAAAAGCTGG AAATTCGAGC CAATGAAGAA CATGGTCACG ACGCGCCGCA CGCTATCGTT TACCCCAGGT AACTGA
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Protein sequence | MLQLKMSRTV PLSTPILLLL AMLVACSKQD DESAPVADAQ STPTVQGTGS PSPSSSQNMA LDQLHEAATQ ALRDNRMYAP AGNNAVEYYL ALREKQPQDA IVNSALTDLL PYTLIAAEQS IHRKDFDEAR RLVNLIEKVD PNAPAFPRLK QALMSDTHTK KSNSQKIVEH NSNKKTSEQA HERMAEQREV AEQRERVRQE INDFERQTPI KRDVEQRTTQ QLSSPVAVPI LIQPSVKTQG SAAAITTTTP TTTIPTTTPQ TPITTAVPAT TQGTALSPIS VKAPPIAPNL RPISTPAPRY PTEALRAGIS GEVVVEIKVS TDGSVANARV VQSTPARVFD REALHTVKSW KFEPMKNMVT TRRTLSFTPG N
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