| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1304 |
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| Symbol | |
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| ID | 6202135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 1435303 |
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| End bp | 1437375 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641702826 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001829999 |
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| Protein GI | 182681839 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.107632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACC AGATCATTGA TGCCCTTCAT CGTCAGGCAC ATGCCGAAGC ATTGAGCCTA
GCCCGCGCAT GGTGCGCCTC TGCACCTGGT GAGGCACAAG CTCAACGCTG GCTCGCGGCT
GCCCTGCAAC AATATGGTGA ACACAAAGCA GCACTTACTG CCAGCGAAGC CGCACTGGCG
CTCGCACCAG AACTACCAGA ACTGCATCTA CAACACGGAC TCCTATTACT TGCACAACAC
GACCTATCTG GCGCCGACGC AGCACTCTCC CGCAGTACCC GCTTAGATCC AAACCAATTC
AATACTTATG TCATGCAAGC ACACTTGGCA ATCGCACGCG GCGCACTGGA CGAAGCCGAG
CAACTCAGCC GCACCGCCGC ACGCATCATT TCGGATCATC CGCAACTACT GGCCGTGAAC
GCCACAATCA CACTGCATCG CGGACAAGTG GACCAGGCAC TGGCCATGCT CTCGCAAGCC
GTCGAACTGC TTCCTGAGGA ACCAGCCGTC TTATTCTCCC TTGGCTTCGC CTATCTCCAG
AAAGGACATA TTGCATTCGC CGAACGCGCC TTCCAACGCG TTATCGAACT GAACCCTCAC
GTCATCCCAG TCCGCGCACT GATCGCCCAA CTTGCACAAC GCCAAGGCAG ACTTGATGAC
GCCCTCCGTA TCCTTGAAGA AGCCTTATCT TTACCTGAGG GCGACACACC AGCCCTACAC
CGACTCACCG GTGAATTTGA GCTCATGGCC GGAAACCCAG ATCGAGCATT GCCCCACCTA
CGTCAAGTAC TGGCAACCTG GCCAGAAGAT CCACGCACCC TGGAAGCACT CCTAACTGCC
TGGAAACAAT TAGATATGGA CGATGACGCC CGCGTCACCC TGGACGCAGC CTTAGACATC
AAAAAGCGTA ACCATGATCT ATGGCTGGCC CGACTGTCCG TGGCCCCCGT CGGGAGCGAC
GAGGCACGCA TTGTCATCGA ACGTTGGCTA TCGGCCATGC CAGAACATCT TCCGGCACTA
GAAACACTGA TGAGCCTACA CGACATACAA AATAATCCTG AAGCCGCCGA AACCGTGGCA
CGGCAAATCG TGGCAATCGA ACCAGGTCGG CTCAGCGGTG AACAACGCAT TGTGGAAGCA
CTACTACAAC GCGACCCACC AGCCGCAGTA GCCTGTTTAC AACAACTCAT TGAAAGCGTC
CCCGAACATG AACGCACCAT ACTCCGGCCC TGGCTCGGCC TCGTCCAAGA TCGTGCTGGC
CAGTTCGAAG CAGCCCTAGC AACCTGGCTG CAATTCCAAG CCGAGCAAGC CAAATACCGG
CTCCCACTCC CACCACAAAC CTGGACTAAC TCCAAACAAT GGCCCGATTT AGCAGCGATC
CCAGCCGAGA CATTGGCACG CCCACTGCTG ATATGGGGGC CTCCAGGCAG CCACGTCGAA
CGCGTCACCA TGATGATGGC CTGGGCCAGC AGCCTGCTGT GTGCTGACCG CTATAGCGAG
ACACCACCGG CAGATCCACT ACAACGCTAC GAAACAGTCT CGGAACTAAC ATCCGGCACA
TTAGCGCCAC AGGCCTTGAT TGATGCATGG CGGCAACAGC TCCCCGCACG CGGCATCGAA
GACGGCAACG TGATCGATTG GTTACTCTGG TGGGACAACA GCCTACTCAC AGCACTGCGT
CCCCACTTAC CCGAAGGCCG ACTCATCATT GTGCTACGGG ACCCACGCGA CATGCTGCTA
GATTGGATCG CCTACGGCTC ACCGATACCA CTGGCACTAG ACTCCCTACA ACACGCTGCA
AACTGGCTAG GAGACATCCT GAATCAAATC GCCACCCTGC ACGAACTTGA CCTGTATCCA
CACCACCTCA TCCGCCTGGA TGGCATTGAA GACAATCCAC AGGCATTGGC CACCACCCTG
GAAAACATCT TCGGCGACCC GTTTCCGATA CCCCCATCAT TGGAAGCACC ACGCCTGCCC
GCTGGCCGCT GGCGCGACTA CCGTGAAGTA CTCAGCAGCG CATTCGATGC TGTTCTCTTA
GCCGCCATGC GCCTGGGTTA TCCCTTTGAC TGA
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| Protein sequence | MQDQIIDALH RQAHAEALSL ARAWCASAPG EAQAQRWLAA ALQQYGEHKA ALTASEAALA
LAPELPELHL QHGLLLLAQH DLSGADAALS RSTRLDPNQF NTYVMQAHLA IARGALDEAE
QLSRTAARII SDHPQLLAVN ATITLHRGQV DQALAMLSQA VELLPEEPAV LFSLGFAYLQ
KGHIAFAERA FQRVIELNPH VIPVRALIAQ LAQRQGRLDD ALRILEEALS LPEGDTPALH
RLTGEFELMA GNPDRALPHL RQVLATWPED PRTLEALLTA WKQLDMDDDA RVTLDAALDI
KKRNHDLWLA RLSVAPVGSD EARIVIERWL SAMPEHLPAL ETLMSLHDIQ NNPEAAETVA
RQIVAIEPGR LSGEQRIVEA LLQRDPPAAV ACLQQLIESV PEHERTILRP WLGLVQDRAG
QFEAALATWL QFQAEQAKYR LPLPPQTWTN SKQWPDLAAI PAETLARPLL IWGPPGSHVE
RVTMMMAWAS SLLCADRYSE TPPADPLQRY ETVSELTSGT LAPQALIDAW RQQLPARGIE
DGNVIDWLLW WDNSLLTALR PHLPEGRLII VLRDPRDMLL DWIAYGSPIP LALDSLQHAA
NWLGDILNQI ATLHELDLYP HHLIRLDGIE DNPQALATTL ENIFGDPFPI PPSLEAPRLP
AGRWRDYREV LSSAFDAVLL AAMRLGYPFD
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