Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1275 |
Symbol | |
ID | 6202070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1401285 |
End bp | 1402304 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641702797 |
Product | integrase family protein |
Protein accession | YP_001829971 |
Protein GI | 182681811 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACGTA AGCCAATCAA AGCAGGCGCG ATTCCGAGGT TTCGCGTGCG CCCTCAGAAG TCCGGCGTGG TGTATTACTA CTACGATCAT GGCGGCAAGC CACGCAAAGA GACGCCACTA GGACGCGACT ACGGGTTAGC CATCAAGCGG TGGGCTGAGC TGGAGCATGC GCAGATCACT CCTGCGATTG CGGTGACGTT CCGCCATGTG GCCGAGCGTT ACCGCGCTGA GGTGATCCCA ACAAAGGCGT ATAACACCCA ACGCATGCAC CACGTATATT TAAACTATCT GTTGCAGTTT TTCGACGATC CCCCCGCGCC GTTTGAGTCA ATTAAACCTG TGAATATCCG CCAGTATCTA GATTGGCGGC CTTTTAAGGT AAGCGCTAAT CGCGAAGTAG CATTATTTTC GCATCTTTGG AATTGGGCGC GGAGTAAGGG AATTACTGAT CTTCCTAACC CTTGTGGGGG TATCCGGCGT AATAAGGAGC GGGGGCGCGA CGTGTATATA GATGATACGA CGTACCGCGC TGTGTACCAG GCAGCGGACC AAACGCTCAG GGATGCGATG GACCTCGCCT ATCTGACGGG GCAGCGTGTG AGTGATGTTG TGTCTATGGA TGAGCGCCAT ATTGTTAATG GCGCTTTGGA GATTTGCCAA GCTAAAACGG GAGTGAAATT GGCGATTGCG ATTACGGGTG AATTGTCAGT TTTAATAAAG CGTATTTTTG ATCGCAAGCG GGGGATGAAG CTGCGTAGCA CGCGTTTGAT TGTGGATGCG AAAGGCTTGG AGCTAAGTCG TATAGGATTG CGTTACAGGT TTGATAAGGC ACGTGCTGCC GCAGGGGTCG CCAAGGAGGT ATTCCAATTC CGCGATCTAC GCGCCAAAGC GGCGACCGAT AAGGCAGATT TGGCGGGCGA TATGCGCCAA GCACAAGCAC AATTGGGGCA TGCGTCGGTG ACGATGACGG AGCACTATGT ACGCAAGCGC AAAGGGGCGA AGGTGACGCC TACGCGGTAA
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Protein sequence | MGRKPIKAGA IPRFRVRPQK SGVVYYYYDH GGKPRKETPL GRDYGLAIKR WAELEHAQIT PAIAVTFRHV AERYRAEVIP TKAYNTQRMH HVYLNYLLQF FDDPPAPFES IKPVNIRQYL DWRPFKVSAN REVALFSHLW NWARSKGITD LPNPCGGIRR NKERGRDVYI DDTTYRAVYQ AADQTLRDAM DLAYLTGQRV SDVVSMDERH IVNGALEICQ AKTGVKLAIA ITGELSVLIK RIFDRKRGMK LRSTRLIVDA KGLELSRIGL RYRFDKARAA AGVAKEVFQF RDLRAKAATD KADLAGDMRQ AQAQLGHASV TMTEHYVRKR KGAKVTPTR
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