| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_1117 |
|---|
| Symbol | |
|---|
| ID | 6203954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M23 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010577 |
|---|
| Strand | + |
|---|
| Start bp | 1265954 |
|---|
| End bp | 1266913 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641702641 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001829819 |
|---|
| Protein GI | 182681659 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGTACCT TCCTACGCCA CTGGATTCAA CGCGCTGCGA TGCTGGCACG CCCGCGTGCT
CCTGAATCCC TGCCGGTCAC ACTAAATAGC CAGCGCATTT ACATGCTGCC CACTCCTTTC
GGCCTATTCT TCGCCATAGT CATGCTAGCG ATGCTGGCAG GAGGACTGAA CTACAACAAC
AACATGACAC TCCTATTGAC ACTCCTGCTC AGTGGAGCTG GCATTGGCAG TGCATTAGCC
ACGCACCTAC AGCTTGCTGG ACTTCGTTTG GAAATACTCC CATCCAAGCC GGCCGCAGCG
GGGCAACCAC TGCAATTGCG ACTTCTACTG GATAGCACCC AGCTACGCTC ACGTCCCGGG
CTGCAGCTTA AGCATGAAGA CGCACAGACG TATTGCTCGC TGCTTCCAGG AGTCCCTGTC
GAAGTCGATT TGAAGATCAC TAACACGCAG CGTGGCTGGC GCAGCTTGTC ACGTATTCGG
ATCTCCACGG TACAACCACT CGGGTTGATC ACGGCTTGGT CCTGGGTATG GCCAGAACAA
CCGTTGCTGG TGTACCCAAC TGCGGAACAA AGCGGTCCAC CACCTCCGAT CAGCGATAGC
AATAAGGCGC ATCGGTGGCG ACACAGCTCG CAGAGTGAAG AAATGCATCA ATTACGCTCG
TATCGGGCTG GCGATGCTGC CCGTACCATC GCCTGGAAAC ACTCAGCACG ATGCAGCGCA
CTGTTAGTCC ATGAGTATCA ACAACCTGCC GCATTGGAAG TGTTCCTGGA TTGGAACCAG
CTGCACACCC TCCCCTACGA GCATCGCATC ACACGCTTGA CGCGTTGGAT CAACGAAGCC
GAGCGGGAAG GCTGGCGCTA TCGCTTATCT CTTCCCGGTC ATCCTGAATT GGACTATGGC
CACGGTGCCG TCCATCACCA CCGCTGCTTG CGCCTACTGG CTCTCTTACC ACATGTCTAA
|
|---|
| Protein sequence | MRTFLRHWIQ RAAMLARPRA PESLPVTLNS QRIYMLPTPF GLFFAIVMLA MLAGGLNYNN
NMTLLLTLLL SGAGIGSALA THLQLAGLRL EILPSKPAAA GQPLQLRLLL DSTQLRSRPG
LQLKHEDAQT YCSLLPGVPV EVDLKITNTQ RGWRSLSRIR ISTVQPLGLI TAWSWVWPEQ
PLLVYPTAEQ SGPPPPISDS NKAHRWRHSS QSEEMHQLRS YRAGDAARTI AWKHSARCSA
LLVHEYQQPA ALEVFLDWNQ LHTLPYEHRI TRLTRWINEA EREGWRYRLS LPGHPELDYG
HGAVHHHRCL RLLALLPHV
|
|---|
| |