Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_1111 |
Symbol | |
ID | 6203922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 1258957 |
End bp | 1260516 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641702635 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_001829813 |
Protein GI | 182681653 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACACGA GCATATCCAG CCAGCCGCCC TGTATCCGGA TTTTTGATAC CACCCTGCGG GACGGTGAGC AATCTCCCGG TTGCAGTATG CCTGCACAAC AAAAACTGGT CATGGCACGC GCATTAGATG CATTGGGCGT AGACATTATC GAGACTGGTT TCCCAGCCAG TTCCCAATCC GACTACGAAG CCATGACGCT GATCGCACGC GAGTTACGTA GACCAACTCT GGCAGTACTG TCACGTTGTC TGCAAGCCGA TATCGAAACT TCAGCACGCG CACTGGAATC AGCAACCAAA CCACGCTTGC ATGTATTTCT GTCAACCAGC CCATTACACC GCGAGCACAA GCTACGCATG AGCAAGGAAC AGGTGCTGGA GTCAGTGCAC AAGCATGTGA GTCTCAGTCG AACCTTGATT GACGATGTGG AATTCTCGGC CGAGGATGCG ACGCGCACAG AGGAGGATTT CCTGATAGAG GTTACCCGCG TGGCAATCGC CGCTGGTGCA ACCACGATCA ACCTGCCAGA CACCGTAGGG TTCAGCACGC CTGAAGAAAT CCGCAACATG TTTACGCGCG TCATCGCGAA CGTCGAAGGT GCAAACAAAG TGATCTTTAG TGCGCACTGC CACGACGATC TGGGTTTGGC CGTTGCTAAC TCGCTGGCAG CCATTGAGGG CGGTGCACGC CAAATCGAAT GTACTATCAA TGGCATTGGT GAGCGCGCTG GTAACTGCGC GCTGGAAGAA CTCACTATGG TGTTGAAAGT ACGCAACGCG TTTTACAACA TTGATACTTC AATCCACACA TCACGTATCG TCTCCACCTC CCAGTTACTG CAACGATTGG TTGGCATGCC CGTGCAACGT AACAAGGCAG TAGTAGGTGC CAATGCCTTT GCACATGAAT CGGGTATCCA CCAGCACGGT ATGCTGCGCC ATCGCGGCAC CTACGAAATC ATGCGTCCAC AAGAAGTCGG TTGGGTATGT TCGCATATGG TGCTCGGCCG CCATAGCGGC CGTGCTGCGG TCGAACAGCG TCTACGCGCA CTGGGCTACT TGCTGGAGGA AGAAGATCTA AAACTGGTAT TTGAAGAATT CAAACAGCTT TGTGAGAAAC AGCGTTTGGT CACCGATGTC GACCTGCAAG TACTGATGCA AGATACAACA GTACAGCATG GCTATCGCTT GGCCTCAATG ACAATCAGTG ATGTTGGTAA CCGGGCCAAC GCACTGGTGG AATTGTCCGA TCCCCAAGGT CAGCGTGTTG CCGAAACTGC GCAAGGCAAC GGCCCAGTAG ATGCACTGTT CGGAGCGCTG GCTGCAGCAA CTGGGGTCAA ACTGGAGTTG GACAGCTATC AGGTACACAG TGTTGGTATC GGGGCCGATG CACGTGGTGA AGCAAACCTC AGTGTACGCC ACAACGATAC TCAGTACGAA GGTACAGGGA CCAGTAAAGA CATTATCGAA GCCAGTGCGC TTGCTTGGCT AGAGGTCGCC AACCGTTTGC TACGTAACCC CGAAAATATG CAAAATAAAC AAAACACAGC ACTGGCCTGA
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Protein sequence | MNTSISSQPP CIRIFDTTLR DGEQSPGCSM PAQQKLVMAR ALDALGVDII ETGFPASSQS DYEAMTLIAR ELRRPTLAVL SRCLQADIET SARALESATK PRLHVFLSTS PLHREHKLRM SKEQVLESVH KHVSLSRTLI DDVEFSAEDA TRTEEDFLIE VTRVAIAAGA TTINLPDTVG FSTPEEIRNM FTRVIANVEG ANKVIFSAHC HDDLGLAVAN SLAAIEGGAR QIECTINGIG ERAGNCALEE LTMVLKVRNA FYNIDTSIHT SRIVSTSQLL QRLVGMPVQR NKAVVGANAF AHESGIHQHG MLRHRGTYEI MRPQEVGWVC SHMVLGRHSG RAAVEQRLRA LGYLLEEEDL KLVFEEFKQL CEKQRLVTDV DLQVLMQDTT VQHGYRLASM TISDVGNRAN ALVELSDPQG QRVAETAQGN GPVDALFGAL AAATGVKLEL DSYQVHSVGI GADARGEANL SVRHNDTQYE GTGTSKDIIE ASALAWLEVA NRLLRNPENM QNKQNTALA
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