| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0670 |
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| Symbol | |
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| ID | 6204091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | - |
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| Start bp | 795037 |
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| End bp | 796377 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641702204 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_001829385 |
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| Protein GI | 182681225 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.702402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCCC AGCTACACCA AAGCATCCGT CTGCTGCAAA TGTCCAACGC CGAATTGCAA
CTGGAAATCA CCGCCGCGAT AGAGAGCAAT CCACTCTTGG ACTGGGCCGA GAACCAATCA
TCGGAGACCA GCGAAGCTAC CGAAAGGGAA GTAGAAACAG AAGATTGGCA AGCCAAAGAA
TCCGCCTGGG ATATCAACGG CAGTAAAAGC AACGAAAATG ACGACAACAA CCCTGCTGAA
CGTCTTACCA CCGGGAACAC TCTCACTGAT CACTTGCTGT GGCAACTGCA CCTCTCCCCA
CTGTCAGCAC GTGATTACCA AATAGGCACC GTCTTGATTG ATGCCATAGA AGAAGATGGT
TACCTGCGTG AACTTTTGTC CACACTGACT GCAACCCTGG CCCCGTTATC CGTAGATGAA
AGCGAACTGC TACCAGTATT ACGACACATT CAATCTTTTG ACCCGAGCGG CGTGGCTGCA
CGCTCGCTGG CCGAGTGCTT GACACTGCAA CTGAAATCAT TGAGAGAAGC GATACCCGGA
CGCACACTTG CACTGCAGAT TGTCAACAGC CCACTGCTCG AACAATTGCC GCGCAGTGGT
GTCACCGGAC TGGCACGCGA ACTGAAACGA CCCTCCCAAG ACGTCCAACA GGCAGTGGAA
TTGATCCGTG GACTGGACCC TCGCCCAGGT AAGAAAATTG GCGACTTAGA AGTTGGAACC
TACGTTGTAC CGGACTGTGT GATCTGGCGC CAACATGGGT TGTGGCAAGC CGCGTTGTTG
GAACGTGCAT TCCCACAGGT CGTCCTCCAC CGCGGCTACG AACAGCTCAT CAACAGCTGC
AATGACGCCA ATGCGAGCTA CCTACGCAAC CAACTCCAGG AAGCACGGTG GCTGCTCAAG
GGCCTGGAAG CACGCGGTGA AACCTTGTTA AAAGTGGTAA ACAGCCTCAT ACGTCACCAA
GCGGGATTCT TGGAATTCGG CCAACACGCG TTACGTCCAT TGACTATCCG CGAATTAGCA
ACGGAACTTG CCCTGCATGA ATCCACCGTA TCCCGTGCAA TTGCTGGCAA GTATGTACGC
ACCCCACGTG GCACCTTACC GCTACGCACC TTTTTCGCTT CAGGAATCAG CACCGACAGC
GGCGGAGAGA CCTCCAGCTC TGCCATTCAA GCAATCATCA GACGTCTCAT AGAAACTGAA
AACCCCCGCA AGCCACTCTC TGACGCCAAA CTAGCTGAAT TACTGAAGAC ATCCGGTATC
CCAGTAGCGC GACGCACCAT AGCAAAGTAT CGTGATGCTA TGAACATCTC CGCATCCCAC
GAACGCGTCC GAGTCCTCTG A
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| Protein sequence | MTPQLHQSIR LLQMSNAELQ LEITAAIESN PLLDWAENQS SETSEATERE VETEDWQAKE
SAWDINGSKS NENDDNNPAE RLTTGNTLTD HLLWQLHLSP LSARDYQIGT VLIDAIEEDG
YLRELLSTLT ATLAPLSVDE SELLPVLRHI QSFDPSGVAA RSLAECLTLQ LKSLREAIPG
RTLALQIVNS PLLEQLPRSG VTGLARELKR PSQDVQQAVE LIRGLDPRPG KKIGDLEVGT
YVVPDCVIWR QHGLWQAALL ERAFPQVVLH RGYEQLINSC NDANASYLRN QLQEARWLLK
GLEARGETLL KVVNSLIRHQ AGFLEFGQHA LRPLTIRELA TELALHESTV SRAIAGKYVR
TPRGTLPLRT FFASGISTDS GGETSSSAIQ AIIRRLIETE NPRKPLSDAK LAELLKTSGI
PVARRTIAKY RDAMNISASH ERVRVL
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