| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | XfasM23_0651 |
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| Symbol | |
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| ID | 6204086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M23 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010577 |
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| Strand | + |
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| Start bp | 769062 |
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| End bp | 773462 |
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| Gene Length | 4401 bp |
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| Protein Length | 1466 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641702186 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001829367 |
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| Protein GI | 182681207 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTA TCGAACAGAA TATTTTGGGC CAATTGCGTC AGCATCGTCG TGCGATTGAC
GATGCGATGA CCCGTGATCG TGGCAGGTTG CTGGGCCTAT GGTCGCGTTG GCAGAGTCAG
CCACATGATC ATGAGGCGCG TGCTAACTTC CAGCGGGTGT TATCTGCATC ACGGGCACAG
CGTCAGGTCC GTGAGAATAA TCAGCCAGTG GTCACGGTGG ATACCCGTTT ACCTATTGCA
CAGGAAGCAG AGCGCATTGT CGCGCTGATC CGGGCGCATC CTGTGGTAAT CATTGCTGGT
GAAACTGGTT CGGGAAAGAC CACGCAATTA CCGAAATTGT GTCTGTCCGC TGGACGTGGC
ATTGCCGGTA CGATCGGGTG TACGCAACCA CGGCGTATTG CAGCGCGTGC GGTGGCAACG
CGGGTGGCTG AGGAGCTTCA AACGCCCTTG GGAATGGTGG TGGGCTTTCA GGTGCGTTTT
ACCGAGAAGG TCAGTGATGC CTCAAGGATC AAGTTCATGA CCGACGGTAT TTTGCTGGCG
GAGGTTGCCA GTGACCGTTG GTTGTCAGCC TATGACACGA TCATTATTGA TGAAGCCCAT
GAGCGCAGTC TCAATATTGA TTTTTTACTC GGTTATCTCA AGCAGTTACT GAAAAAGCGT
GCTGATTTGA AGGTGATCGT GACCTCGGCG ACGATCGACA CGGCACGCTT TTCCAAGCAT
TTTGATGATG CGCCGGTGAT TCATGTGGCT GGACGCACCT ACCCGGTGGA GGTGCGTTAC
CGTCCGTTGG ATGCGATGTG GGCTTCTGAT GATCGCCTTG GGGAAGCCTA CGGCGGAACT
GAGTCCCTGG CTGTGAATCG TTGGGCGGGA GGATCTGAAG GTGACGGCGC GCTGTCAAAG
CCCATCGTGG CGCTGCCTCA AGAGGATCAG CGTACTGTCA ATGATGCGAT TGTGGCAGTG
ATCGACGAGA TCACCCGTGA GGACCCGCAC GGTGATGTAT TGGTGTTTCT GCCCGGTGAG
CGTGAGATTC GTGAGCTGTA TCGGGTACTG GAGCGGCGTA AGTATCGTGA GACGGAACTG
CTGCCGTTAT ACGCGCGGTT GTCGGCTCGC GATCAAGATC GGGTGTTCAA CCCCGGCTCT
GGGCGTCGCC TGGTGCTGAC GACCAACGTT GCTGAAACAT CATTGACGGT GCCACGGATC
CGCTATGTGA TCGATCCGGG CTATGCGCGC GTGAAGCGCT ACAGTGCGCG CCAGAAGTTG
GACAGGTTAT ACATTGAGCC GATCAGTCAG GCCAGTGCCA ACCAGCGTGC CGGTCGTTGC
GGCCGCATTG CCGATGGTGT TTGTTACCGG CTCTATAGTG AGGAAGACTT TCTTGCACGG
TCGGCATTCA CCGATCCTGA AATTCGGCGC TCCTCCCTGG CCGGGGTGAT TTTGCGCATG
TTGCAGTTGG GCCTGGGACG GATTGGTGGG AGTGCTGCTT CCTTGAGCGA GCCTGTTTCA
GGGCCGGAGC AGCAGCGCAC CTCCTGGATC ATTGAAAGTT TCTCGTTTCT GGAGCCGCCG
GATGAACGTG CGGTTGCCGA TGGCTGGCAA CAATTGGTCG AATTGGGGGC GGTGGATAGT
CAGCATGTAT TGACTGCGAT CGGCCGCGAG ATGGCACGGT TGCCGGTGGA CGTGAAGTCG
GCGCGCATGC TGGTTGCTGC GCGCCAGCAC GGCTGTGTGC ATGAAATGAC GGTGATCGCC
GCTTTTCTGG GGGTCCAGGA TCCACGCGAG CGTCCTCCGG AGGCGCGTGA AGCGGCCGAC
AATGCACATG CGAAGTTTGC CGATGCACGT TCGGAGTTCG TTGGTATCTT GCGTTTATGG
GAGGCTTACC GCCAGATTCG TGGGCATATG ACTCAGTCCA AGTTACGCCA GTGGTGCCAG
CGTCATTTTC TGGGCTTTCT TCACATGCGC GAGTGGTGCG AGTTGCAGCT GCAATTGTCG
CTGTTGTGTG CGGGGGAGCA GGCGGAGCAG CCACGCAAGG GGCGAGCGGC GGCGGCCTTT
CCGAAGGAGG GATGCTTACC GTCTCAGCGA TCAAAGCCAG GGGCCGAGGT AGGGAAGGGC
AACGAGTTAC CTTCAAGTGC GACCGTGTTG CAGGCACTGT TAGCGGGGCA GGGGACCTCT
ACTCAGAGTG AACATCGTGG TAATACACCG AGTCGTGGTC AGCTGCATCG TGCGGCGCGC
TTGGCGCGTG AGCGTAGCGC GGTTCTCAAG GTTACTCACA ACACCCAGAG TGTGAAGGCG
GTTGCAGGGC AGAGTGTTTC TCATGCCGGT ATGCAGGCGC AGTTTGCGGT GCCACCTAAT
GATGCACCGC ATATCGGTGA GCGTGAGCGT GCGGCTGCCT ATCAGGCGTT GCATCGTGCG
TTGCTGACTG GGTTGCCGAT CCAGATTGGC CATCGTACCG AGAAGGGAGA TTTTCAGGCG
CCGCGCCAGC GCCGTTTTAT GTTGTTTCCT GGTTCGATGT TGGCGAAGAA GCCGCCACCG
TGGGTGCTCG CAGCGAACTT GCTGGATACA CAGAAGGTGT GGGGCTTGAC GAATGCTGCG
ATTGAGCCTG ATTGGGTGAT TGCTGAATTG CCGCATTTGT TGATGCGCAA GCATTTCAAT
CCGCATTGGT CCCGTACCCA GGGCCGAGTG TTGGTGTCTG AGCAGATTAG TTTGTTTGGG
TTGCTGTTGG CGCCGAAGAA GCCGATGCAC TATGGCCGCA TTGATCCGGT GGCAGCGCAT
GATCTTTTTG TACGCCAAGG GTTGGTGACG GGGGAGATCA ACACGCGTGC CGGTTTTGTT
GCTGACAATC TCAAGGTGTT GGAGCAGGCG CACGAGGAGG AGGCTAAGTT GCGTCGTGCC
GGTATTGTGG CCGATGAGGA TTGGCAGGCG CGTTGGTATT TTGACCGGGT GCCGAGTGAC
ATCCATACAG CCGATGCACT GGATTCCTGG TGGAAGGGGC TGCCAGTGGA GAAGCGGCAC
GGTCTGTATT GGTCATTGAT CGACTTGTTG CCTGGCGAAG GGGGGGAGGA GGATCGTTAT
CCGAAGTATT TTGCACTCGG GGATGTGAGG TTGCCGCTGC ACTATTCGTT TGATCCAGGT
GCAGTGGATG ACGGTGTCAC TTTGGAGGTG CCTTTGCATC TGCTTAATGC GTTGGATCCG
GTACGGTTGT CGTGGCTGGT GCCTGGTTTT GTTGCCGATA AAGCGGCGGC GCTGATCCGT
TCGCTGCCCA AGGCGCTACG CCGCAGTTAT GTGCCGGCTC CAGATTTTGC CCGTGCGTTT
GCTCAAGCGT TCCAGCAGCC TTCGGCCGAT GAGATGCGTG GTGAGTTGGC ACGCTTTTTG
TCGCGTATTA CCGGGGTACG GGTGGCTGCG ATTGATTTTG ATGAACAGAC ATTGGAACCT
TATCTGCATC TGCGTGTGCG TTTGTATGAT GAGTCTGGTC AGGTTTTGGC GGAGTCGCGC
GATTTTGATG CGTTGCGTGC CCGTTTTGGT AGCTACTCGG GCGAGGCGTT CGTAGCCCGT
GCCGGGCGCA CGCTCATCAT GGAGGAGCTA CGCGAGTTTC CTGCTGTGTC GATTCCGCTT
CAGCTTACCG GTGAGGCTGG GGTTCCGATG TACCCTGCGT TGGTTGACGA TGGTGAGATG
GCGGCGTTAC GGATTTTTGC TGATCCCACT GAGGCCGCAC AGGTGCATCC CCATGGCGTA
CGGCGGCTCT TGGAGATCGC CTTGGCCAAC AAGATCAAGC AGGCGCGCAA GCAGTTGCCG
GTGTCTTCCA AGAGTGGGCT GTTATATGCG GCCATTGAGT CAAAAGAATG TTTGCGTGAT
GACCTTGTCA AGGCGGCATT GAATGCGGTG TTGGCTCATG GCTTGGAGTC GATCCGTGAT
CCTGTTGCGT TTGCGCAGTG CCGTGATGTG GCGGCGCAGC AGCTTTTTTC TGAGGCGATG
GCGCGACTCA GTTTGGCCGA GGAGATTTTG GCTGCCGTGG CTGAGCTGAA GCCGTTGCTG
GAAGCACCAT TGATGGGGTG GGCGCGTGGC AATCTGGATG ACATGGAACG GCAGTTGGCG
CAGTTGGTGT ATCCAGGTTT TTTGCGTCAA ACACCCGCCG ATGTGTTGAC GCAGTATCCG
CGCTATCTGA AAGCGATGAT GATGCGCAGC GAGCGCGCTA AGCGCGACCC GTCGCGTGAT
CAGGCGCGTA TGCTGGAACT CAAGCCATTT TTGGATGCTC TGGAAGTGGC AATGGCGCAG
GGTGTTTCCG ACACACCGGG GTGGGAGACA TTGCGTTGGG ATGTGGAGGA GTTGCGGGTT
TCACTGTTTG CCCAGGAATT GGGGGTGCGC TCGGGGATTT CTGTCAAGAA ATTGGCGCAA
CGTTTGGCTG CGTTGCGTTG A
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| Protein sequence | MSVIEQNILG QLRQHRRAID DAMTRDRGRL LGLWSRWQSQ PHDHEARANF QRVLSASRAQ
RQVRENNQPV VTVDTRLPIA QEAERIVALI RAHPVVIIAG ETGSGKTTQL PKLCLSAGRG
IAGTIGCTQP RRIAARAVAT RVAEELQTPL GMVVGFQVRF TEKVSDASRI KFMTDGILLA
EVASDRWLSA YDTIIIDEAH ERSLNIDFLL GYLKQLLKKR ADLKVIVTSA TIDTARFSKH
FDDAPVIHVA GRTYPVEVRY RPLDAMWASD DRLGEAYGGT ESLAVNRWAG GSEGDGALSK
PIVALPQEDQ RTVNDAIVAV IDEITREDPH GDVLVFLPGE REIRELYRVL ERRKYRETEL
LPLYARLSAR DQDRVFNPGS GRRLVLTTNV AETSLTVPRI RYVIDPGYAR VKRYSARQKL
DRLYIEPISQ ASANQRAGRC GRIADGVCYR LYSEEDFLAR SAFTDPEIRR SSLAGVILRM
LQLGLGRIGG SAASLSEPVS GPEQQRTSWI IESFSFLEPP DERAVADGWQ QLVELGAVDS
QHVLTAIGRE MARLPVDVKS ARMLVAARQH GCVHEMTVIA AFLGVQDPRE RPPEAREAAD
NAHAKFADAR SEFVGILRLW EAYRQIRGHM TQSKLRQWCQ RHFLGFLHMR EWCELQLQLS
LLCAGEQAEQ PRKGRAAAAF PKEGCLPSQR SKPGAEVGKG NELPSSATVL QALLAGQGTS
TQSEHRGNTP SRGQLHRAAR LARERSAVLK VTHNTQSVKA VAGQSVSHAG MQAQFAVPPN
DAPHIGERER AAAYQALHRA LLTGLPIQIG HRTEKGDFQA PRQRRFMLFP GSMLAKKPPP
WVLAANLLDT QKVWGLTNAA IEPDWVIAEL PHLLMRKHFN PHWSRTQGRV LVSEQISLFG
LLLAPKKPMH YGRIDPVAAH DLFVRQGLVT GEINTRAGFV ADNLKVLEQA HEEEAKLRRA
GIVADEDWQA RWYFDRVPSD IHTADALDSW WKGLPVEKRH GLYWSLIDLL PGEGGEEDRY
PKYFALGDVR LPLHYSFDPG AVDDGVTLEV PLHLLNALDP VRLSWLVPGF VADKAAALIR
SLPKALRRSY VPAPDFARAF AQAFQQPSAD EMRGELARFL SRITGVRVAA IDFDEQTLEP
YLHLRVRLYD ESGQVLAESR DFDALRARFG SYSGEAFVAR AGRTLIMEEL REFPAVSIPL
QLTGEAGVPM YPALVDDGEM AALRIFADPT EAAQVHPHGV RRLLEIALAN KIKQARKQLP
VSSKSGLLYA AIESKECLRD DLVKAALNAV LAHGLESIRD PVAFAQCRDV AAQQLFSEAM
ARLSLAEEIL AAVAELKPLL EAPLMGWARG NLDDMERQLA QLVYPGFLRQ TPADVLTQYP
RYLKAMMMRS ERAKRDPSRD QARMLELKPF LDALEVAMAQ GVSDTPGWET LRWDVEELRV
SLFAQELGVR SGISVKKLAQ RLAALR
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